Evidence map›Paper›PMID 24947980›Full record

ArticleCancer genetics2014

Increased copy number of the DLX4 homeobox gene in breast axillary lymph node metastasis.

Clarissa Torresan, Márcia M C Oliveira, Silma R F Pereira, Enilze M S F Ribeiro, Catalin Marian, Yuriy Gusev, Rubens S Lima, Cicero A Urban, Patricia E Berg, Bassem R Haddad and 2 more

Open access · greenAbstract read
In one paragraph

Article in Cancer genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

Clarissa TorresanDepartment of Genetics, Federal University of Paraná, Curitiba, PR, Brazil.
Márcia M C OliveiraDepartment of Genetics, Federal University of Paraná, Curitiba, PR, Brazil.
Silma R F PereiraDepartment of Biology, Federal University of Maranhão, São Luis, MA, Brazil.
Enilze M S F RibeiroDepartment of Genetics, Federal University of Paraná, Curitiba, PR, Brazil.
Catalin MarianDepartment of Biochemistry, University of Medicine and Pharmacy, Timisoara, Romania.
Yuriy GusevInnovation Center for Biomedical Informatics, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC, USA.
Rubens S LimaBreast Unit, Hospital Nossa Senhora das Graças, Curitiba, PR, Brazil.
Cicero A UrbanBreast Unit, Hospital Nossa Senhora das Graças, Curitiba, PR, Brazil; Positivo University, Curitiba, PR, Brazil.
Patricia E BergDepartment of Biochemistry and Molecular Medicine, George Washington University Medical Center, Washington, DC, USA.
Bassem R HaddadDepartment of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC, USA.
Iglenir J CavalliDepartment of Genetics, Federal University of Paraná, Curitiba, PR, Brazil.
Luciane R CavalliDepartment of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC, USA. Electronic address: lrc@georgetown.edu.
Universidade Federal do Paraná · BRGeorgetown University · USHospital Nossa Senhora das Graças · BRUniversidade Federal do Maranhão · BRWest University of Timişoara · RO

Funding

Tissue Culture Shared ResourceP30CA051008 · NCI · GEORGETOWN UNIVERSITY · PI Louis M Weiner · 1990 to 2026
$71.5M
HSRD VA CDA 10-034NCI NIH HHS P30 CA051008
6 · The paper itself

Abstract

DLX4 is a homeobox gene strongly implicated in breast tumor progression and invasion. Our main objective was to determine the DLX4 copy number status in sentinel lymph node (SLN) metastasis to assess its involvement in the initial stages of the axillary metastatic process. A total of 37 paired samples of SLN metastasis and primary breast tumors (PBT) were evaluated by fluorescence in situ hybridization, quantitative polymerase chain reaction and array comparative genomic hybridization assays. DLX4 increased copy number was observed in 21.6% of the PBT and 24.3% of the SLN metastasis; regression analysis demonstrated that the DLX4 alterations observed in the SLN metastasis were dependent on the ones in the PBT, indicating that they occur in the primary tumor cell populations and are maintained in the early axillary metastatic site. In addition, regression analysis demonstrated that DLX4 alterations (and other DLX and HOXB family members) occurred independently of the ones in the HER2/NEU gene, the main amplification driver on the 17q region. Additional studies evaluating DLX4 copy number in non-SLN axillary lymph nodes and/or distant breast cancer metastasis are necessary to determine if these alterations are carried on and maintained during more advanced stages of tumor progression and if could be used as a predictive marker for axillary involvement.

Indexed as

DNA Copy Number VariationsAdultAgedAxillaBreast NeoplasmsComparative Genomic HybridizationErb-b2 Receptor Tyrosine KinasesFemaleGenes, HomeoboxHomeodomain ProteinsHumansIn Situ Hybridization, FluorescenceLymphatic MetastasisLymph NodesMiddle AgedReal-Time Polymerase Chain ReactionDLX4 protein, humanERBB2 protein, humanErb-b2 Receptor Tyrosine KinasesHomeodomain ProteinsReceptors, EstrogenReceptors, ProgesteroneTranscription Factorsbreast cancercopy numberDLX4Homeobox genemetastasissentinel lymph node

Identifiers

PMID24947980
PMCPMC5806608
OpenAlexW1985794577

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.