ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2014
Genome-wide investigation of genetic changes during modern breeding of Brassica napus.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
27 citing papers in PubMed, 58 citations in OpenAlex.
- Breeding and biotechnology approaches to enhance the nutritional quality of rapeseed byproducts for sustainable alternative protein sources- a critical review.Frontiers in plant science · 2024Review
- Comprehensive genomic analyses of Vigna unguiculata provide insights into population differentiation and the genetic basis of key agricultural traits.Plant biotechnology journal · 2023Article
- Rapeseed Domestication Affects the Diversity of Rhizosphere Microbiota.Microorganisms · 2023Article
- Single trait versus principal component based association analysis for flowering related traits in pigeonpea.Scientific reports · 2022Article
- Linkage disequilibrium and population structure in a core collection of Brassica napus (L.).PloS one · 2022Article
- Construction of a Quantitative Genomic Map, Identification and Expression Analysis of Candidate Genes for Agronomic and Disease-Related Traits inFrontiers in plant science · 2022Article
- Identification of resistance loci against new pathotypes of Plasmodiophora brassicae in Brassica napus based on genome-wide association mapping.Scientific reports · 2021Article
- Reconstituting the genome of a young allopolyploid crop, Brassica napus, with its related species.Plant biotechnology journal · 2019Article
- Genetic changes in a novel breeding population of Brassica napus synthesized from hundreds of crosses between B. rapa and B. carinata.Plant biotechnology journal · 2018Article
- Evaluation and Recommendations for Routine Genotyping Using Skim Whole Genome Re-sequencing in Canola.Frontiers in plant science · 2018Article
- Diversity and Genome Analysis of Australian and Global OilseedFrontiers in plant science · 2018Article
- A genome-wide survey with different rapeseed ecotypes uncovers footprints of domestication and breeding.Journal of experimental botany · 2017Article
- Synteny analysis of genes and distribution of loci controlling oil content and fatty acid profile based on QTL alignment map in Brassica napus.BMC genomics · 2017Article
- Genetic variants associated with the root system architecture of oilseed rape (Brassica napus L.) under contrasting phosphate supply.DNA research : an international journal for rapid publication of reports on genes and genomes · 2017Article
- Breeding histories and selection criteria for oilseed rape in Europe and China identified by genome wide pedigree dissection.Scientific reports · 2017Article
- GBS-based single dosage markers for linkage and QTL mapping allow gene mining for yield-related traits in sugarcane.BMC genomics · 2017Article
- Two genomic regions associated with fiber quality traits in Chinese upland cotton under apparent breeding selection.Scientific reports · 2016Article
- Breeding signature of combining ability improvement revealed by a genomic variation map from recurrent selection population in Brassica napus.Scientific reports · 2016Article
- A genome-wide association study reveals novel elite allelic variations in seed oil content of Brassica napus.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016Article
- High-throughput multiplex cpDNA resequencing clarifies the genetic diversity and genetic relationships among Brassica napus, Brassica rapa and Brassica oleracea.Plant biotechnology journal · 2016Article
Corrections and comments
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Authors and funding
12 authors at 5 institutions in 4 countries.
Funding
Abstract
key messageConsiderable genome variation had been incorporated within rapeseed breeding programs over past decades. In past decades, there have been substantial changes in phenotypic properties of rapeseed as a result of extensive breeding effort. Uncovering the underlying patterns of allelic variation in the context of genome organisation would provide knowledge to guide future genetic improvement. We assessed genome-wide genetic changes, including population structure, genetic relatedness, the extent of linkage disequilibrium, nucleotide diversity and genetic differentiation based on F ST outlier detection, for a panel of 472 Brassica napus inbred accessions using a 60 k Brassica Infinium® SNP array. We found genetic diversity varied in different sub-groups. Moreover, the genetic diversity increased from 1950 to 1980 and then remained at a similar level in China and Europe. We also found ~6-10 % genomic regions revealed high F ST values. Some QTLs previously associated with important agronomic traits overlapped with these regions. Overall, the B. napus C genome was found to have more high F ST signals than the A genome, and we concluded that the C genome may contribute more valuable alleles to generate elite traits. The results of this study indicate that considerable genome variation had been incorporated within rapeseed breeding programs over past decades. These results also contribute to understanding the impact of rapeseed improvement on available genome variation and the potential for dissecting complex agronomic traits.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.