Evidence map›Paper›PMID 24946736›Full record

ArticleScientific reports2014

Analysis of phytoplasma-responsive sRNAs provide insight into the pathogenic mechanisms of mulberry yellow dwarf disease.

Ying-Ping Gai, Yi-Qun Li, Fang-Yue Guo, Chuan-Zhong Yuan, Yao-Yao Mo, Hua-Liang Zhang, Hong Wang, Xian-Ling Ji

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
6.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 41 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Plant Hormones in Phytoplasma Infected Plants.Frontiers in plant science · 2019
    Review
  8. Article
  9. Article
  10. ceRNA Cross-Talk in Paulownia Witches' Broom Disease.International journal of molecular sciences · 2018
    Article
  11. Plant Responses to Pathogen Attack: Small RNAs in Focus.International journal of molecular sciences · 2018
    Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. A Novel LncRNA,Frontiers in plant science · 2018
    Article
  17. Genetic diversity among mulberry genotypes from seven countries.Physiology and molecular biology of plants : an international journal of functional plant biology · 2017
    Article
  18. Article
  19. Comparative Proteomic Analysis ofInternational journal of genomics · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Ying-Ping GaiState Key Laboratory of Crop Biology, Shandong Agricultural University, Taian, Shandong, 271018, People's Republic of China.
Yi-Qun LiState Key Laboratory of Crop Biology, Shandong Agricultural University, Taian, Shandong, 271018, People's Republic of China.
Fang-Yue GuoCollege of Forestry, Shandong Agricultural University, Taian, Shandong, 271018, People's Republic of China.
Chuan-Zhong YuanState Key Laboratory of Crop Biology, Shandong Agricultural University, Taian, Shandong, 271018, People's Republic of China.
Yao-Yao MoCollege of Forestry, Shandong Agricultural University, Taian, Shandong, 271018, People's Republic of China.
Hua-Liang ZhangState Key Laboratory of Crop Biology, Shandong Agricultural University, Taian, Shandong, 271018, People's Republic of China.
Hong WangCollege of Forestry, Shandong Agricultural University, Taian, Shandong, 271018, People's Republic of China.
Xian-Ling Ji1] State Key Laboratory of Crop Biology, Shandong Agricultural University, Taian, Shandong, 271018, People's Republic of China [2] College of Forestry, Shandong Agricultural University, Taian, Shandong, 271018, People's Republic of China.
Shandong Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The yellow dwarf disease associated with phytoplasmas is one of the most devastating diseases of mulberry and the pathogenesis involved in the disease is poorly understood. To analyze the molecular mechanisms mediating gene expression in mulberry-phytoplasma interaction, the comprehensive sRNA changes of mulberry leaf in response to phytoplasma-infection were examined. A total of 164 conserved miRNAs and 23 novel miRNAs were identified, and 62 conserved miRNAs and 13 novel miRNAs were found to be involved in the response to phytoplasma-infection. Meanwhile, target genes of the responsive miRNAs were identified by sequencing of the degradome library. In addition, the endogenous siRNAs were sequenced, and their expression profiles were characterized. Interestingly, we found that phytoplasma infection induced the accumulation of mul-miR393-5p which was resulted from the increased transcription of MulMIR393A, and mul-miR393-5p most likely initiate the biogenesis of siRNAs from TIR1 transcript. Based on the results, we can conclude that phytoplasma-responsive sRNAs modulate multiple hormone pathways and play crucial roles in the regulation of development and metabolism. These responsive sRNAs may work cooperatively in the response to phytoplasma-infection and be responsible for some symptoms in the infected plants.

Indexed as

MicroRNAsMorusPhytoplasmaPlant DiseasesPlant LeavesMicroRNAs

Identifiers

PMID24946736
PMCPMC5381547
OpenAlexW2070386776

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.