Evidence map›Paper›PMID 24943842›Full record

ArticleMolecular biology of the cell2014

Mathematical model with spatially uniform regulation explains long-range bidirectional transport of early endosomes in fungal hyphae.

Jia Gou, Leah Edelstein-Keshet, Jun Allard

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Jia GouDepartment of Mathematics, University of British Columbia, Vancouver, BC V6T1Z2, Canada.
Leah Edelstein-KeshetDepartment of Mathematics, University of British Columbia, Vancouver, BC V6T1Z2, Canada.
Jun AllardDepartment of Mathematics, Department of Physics and Astronomy, and Center for Complex Biological Systems, University of California, Irvine, Irvine, CA 92617 jun.allard@uci.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In many cellular contexts, cargo is transported bidirectionally along microtubule bundles by dynein and kinesin-family motors. Upstream factors influence how individual cargoes are locally regulated, as well as how long-range transport is regulated at the whole-cell scale. Although the details of local, single-cargo bidirectional switching have been extensively studied, it remains to be elucidated how this results in cell-scale spatial organization. Here we develop a mathematical model of early endosome transport in Ustilago maydis. We demonstrate that spatiotemporally uniform regulation, with constant transition rates, results in cargo dynamics that is consistent with experimental data, including data from motor mutants. We find that microtubule arrays can be symmetric in plus-end distribution but asymmetric in binding-site distribution in a manner that affects cargo dynamics and that cargo can travel past microtubule ends in microtubule bundles. Our model makes several testable predictions, including secondary features of dynein and cargo distributions.

Indexed as

Biological TransportDyneinsEndosomesFungal ProteinsHyphaeKinesinsMicrotubulesModels, BiologicalUstilagoDyneinsFungal ProteinsKinesins

Identifiers

PMID24943842
PMCPMC4142613

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.