Evidence map›Paper›PMID 24942562›Full record

ArticleNature communications2014

Shared VH1-46 gene usage by pemphigus vulgaris autoantibodies indicates common humoral immune responses among patients.

Michael Jeffrey Cho, Agnes S Y Lo, Xuming Mao, Arielle R Nagler, Christoph T Ellebrecht, Eric M Mukherjee, Christoph M Hammers, Eun-Jung Choi, Preety M Sharma, Mohamed Uduman and 9 more

Open access · bronzeAbstract read
In one paragraph

Article in Nature communications, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Pemphigus and Pemphigoid: From Disease Mechanisms to Druggable Pathways.The Journal of investigative dermatology · 2022
    Review
  5. Review
  6. Article
  7. Review
  8. Article
  9. A three-body affair.Nature nanotechnology · 2020
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Review
  18. Article
  19. Pemphigus.Nature reviews. Disease primers · 2017
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 4 institutions in 1 country.

Michael Jeffrey ChoDepartment of Dermatology, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Agnes S Y LoDivision of Hematology-Oncology, Department of Medicine, Beth Israel Deaconess Medical Center, Boston, Massachusetts 02215, USA.
Xuming MaoDepartment of Dermatology, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Arielle R NaglerDepartment of Dermatology, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Christoph T EllebrechtDepartment of Dermatology, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Eric M MukherjeeDepartment of Dermatology, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Christoph M HammersDepartment of Dermatology, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Eun-Jung ChoiDepartment of Dermatology, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Preety M SharmaDepartment of Dermatology, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Mohamed UdumanInterdepartmental Program in Computational Biology and Bioinformatics, Yale University, and Department of Pathology, Yale University School of Medicine, New Haven, Connecticut 06511, USA.
Hong LiDepartment of Dermatology, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Ann H RuxDepartment of Pathology and Laboratory Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Sara A FarberDepartment of Dermatology, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Courtney B RubinDepartment of Dermatology, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Steven H KleinsteinInterdepartmental Program in Computational Biology and Bioinformatics, Yale University, and Department of Pathology, Yale University School of Medicine, New Haven, Connecticut 06511, USA.
Bruce S SachaisDepartment of Pathology and Laboratory Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Marshall R PosnerThe Tisch Cancer Institute, Mount Sinai Medical Center, New York, New York 10029, USA.
Lisa A CavaciniThe Tisch Cancer Institute, Mount Sinai Medical Center, New York, New York 10029, USA.ORCID 0000000193897918
Aimee S PayneDepartment of Dermatology, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
University of Pennsylvania · USMount Sinai Medical Center · USYale University · USBeth Israel Deaconess Medical Center · US

Funding

MEDICAL INFORMATICS RESEARCH TRAINING AT YALET15LM007056 · NLM · YALE UNIVERSITY · PI Mark Bender Gerstein, LUCILA OHNO-MACHADO · 1987 to 2026
$22.2M
Penn Dermatology Research Training ProgramT32AR007465 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI Elizabeth Anne Grice, David Joel Margolis · 1986 to 2026
$9.0M
Understanding molecular mechanisms underlying the formation of the blue nevus andP30AR057217 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI COTSARELIS, GEORGE · 2009 to 2013
$3.2M
Proatherogenic properties of platelet fator 4R01HL078726 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI SACHAIS, BRUCE S · 2006 to 2010
$2.1M
Role of autoantibody isotype in pemphigus pathogenesisR01AR057001 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI PAYNE, AIMEE S · 2010 to 2014
$1.7M
Cloning and characterization of human pemphigus autoantibodiesK08AR053505 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI PAYNE, AIMEE S · 2007 to 2011
$638k
Computational tools for analysis of B cell somatic hypermutationR03AI092379 · NIAID · YALE UNIVERSITY · PI KLEINSTEIN, STEVEN H. · 2011 to 2012
$166k
NHLBI NIH HHS HL078726-S1NHLBI NIH HHS R01 HL078726NIAID NIH HHS R03 AI092379NIAID NIH HHS R03AI092379NIAMS NIH HHS AR053505NIAMS NIH HHS AR057001NIAMS NIH HHS K08 AR053505NIAMS NIH HHS P30 AR057217NIAMS NIH HHS P30-AR057217NIAMS NIH HHS R01 AR057001NIAMS NIH HHS T32 AR007465NIAMS NIH HHS T32-AR007465NLM NIH HHS T15 LM007056NLM NIH HHS T15-LM07056
6 · The paper itself

Abstract

Pemphigus vulgaris (PV) is a potentially fatal blistering disease caused by autoantibodies (autoAbs) against desmoglein 3 (Dsg3). Here, we clone anti-Dsg3 antibodies (Abs) from four PV patients and identify pathogenic VH1-46 autoAbs from all four patients. Unexpectedly, VH1-46 autoAbs had relatively few replacement mutations. We reverted antibody somatic mutations to their germline sequences to determine the requirement of mutations for autoreactivity. Three of five VH1-46 germline-reverted Abs maintain Dsg3 binding, compared with zero of five non-VH1-46 germline-reverted Abs. Site-directed mutagenesis of VH1-46 Abs demonstrates that acidic amino-acid residues introduced by somatic mutation or heavy chain VDJ recombination are necessary and sufficient for Dsg3 binding. Our data suggest that VH1-46 autoantibody gene usage is commonly found in PV because VH1-46 Abs require few to no mutations to acquire Dsg3 autoreactivity, which may favour their early selection. Common VH gene usage indicates common humoral immune responses, even among unrelated patients.

Indexed as

Immunity, HumoralAutoantibodiesComplementarity Determining RegionsDesmoglein 3HumansPemphigusAutoantibodiesComplementarity Determining RegionsDesmoglein 3DSG3 protein, human

Identifiers

PMID24942562
PMCPMC4120239
OpenAlexW1998123557

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.