Evidence map›Paper›PMID 24940671›Full record

ArticleNucleosides, nucleotides & nucleic acids2014

Transcriptomic approach to Lesch-Nyhan disease.

Luce Dauphinot, Lionel Mockel, Julie Cahu, H A Jinnah, Morgan Ledroit, Marie-Claude Potier, Irène Ceballos-Picot

Open access · greenAbstract read
In one paragraph

Article in Nucleosides, nucleotides & nucleic acids, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Purinosome formation as a function of the cell cycle.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Luce Dauphinota CRICM, UPMC Hôpital de la Pitié-Salpêtrière , Paris , France.
Lionel Mockel
Julie Cahu
H A Jinnah
Morgan Ledroit
Marie-Claude Potier
Irène Ceballos-Picot
Hôpital Necker-Enfants Malades · FREmory University · USPitié-Salpêtrière Hospital · FRSorbonne Université · FR

Funding

Lesch-Nyhan Disease: Neuroanatomic and Biochemical Bases of the PhenotypeR01HD053312 · NICHD · JOHNS HOPKINS UNIVERSITY · PI SCHRETLEN, DAVID J · 2008 to 2011
$2.0M
NICHD NIH HHS HD 053312NICHD NIH HHS R01 HD053312
6 · The paper itself

Abstract

Lesch-Nyhan disease (LND) is an X-linked metabolic disease caused by various mutations in the gene HPRT1 encoding an enzyme of purine metabolism, hypoxanthine guanine phosphoribosyltransferase (HPRT). In its most severe form, LND patients suffer from overproduction of uric acid along with neurological or behavioural difficulties including self-injurious behaviours. To gain more insight into pathogenesis, we compared the transcriptome from human LND fibroblasts to normal human fibroblasts using a microarray with 60,000 probes corresponding to the entire human genome. Using stringent criteria, we identified 25 transcripts whose expression was significantly different between LND and control cells. These genes were confirmed by quantitative RT-PCR to be dysregulated in LND cells. Moreover, bioinformatic analysis of microarray data using gene ontology (GO) highlighted clusters of genes displaying biological processes most significantly affected in LND cells. These affected genes belonged to specific processes such as cell cycle and cell-division processes, metabolic and nucleic acid processes, demonstrating the specific nature of the changes and providing new insights into LND pathogenesis.

Indexed as

Gene Expression ProfilingFibroblastsGene OntologyHumansLesch-Nyhan SyndromeHPRThypoxanthine phosphoribosyltransferaseLesch-Nyhan diseasemicroarray, gene ontologytranscriptome

Identifiers

PMID24940671
PMCPMC4206182
OpenAlexW1993123496

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.