Evidence map›Paper›PMID 24939184›Full record

ArticleG3 (Bethesda, Md.)2014

Self-incompatibility in Brassicaceae: identification and characterization of SRK-like sequences linked to the S-locus in the tribe Biscutelleae.

Jean-Baptiste Leducq, Célia C Gosset, Rita Gries, Kevin Calin, Eric Schmitt, Vincent Castric, Xavier Vekemans

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.4field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
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  6. Article
  7. Self-compatibility in peach [Horticulture research · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Jean-Baptiste LeducqInstitut de Biologie Intégrative et des Systèmes, Département de Biologie, PROTEO, Pavillon Charles-Eugène-Marchand, 1030 avenue de la Médecine - Université Laval - Québec (QC) G1V 0A6, Canada Institut des Sciences de l'Évolution UMR 5554, CNRS, Université Montpellier 2, Place Eugène Bataillon, C.C. 065 - 34095 Montpellier cedex 05, France jean-baptiste.leducq.1@ulaval.ca.
Célia C GossetInstitut des Sciences de l'Évolution UMR 5554, CNRS, Université Montpellier 2, Place Eugène Bataillon, C.C. 065 - 34095 Montpellier cedex 05, France Laboratoire Génétique et Evolution des Populations Végétales, CNRS UMR 8198, Université Lille1, F-59655 Villeneuve d'Ascq cedex, France.
Rita GriesLaboratoire Génétique et Evolution des Populations Végétales, CNRS UMR 8198, Université Lille1, F-59655 Villeneuve d'Ascq cedex, France.
Kevin CalinLaboratoire Génétique et Evolution des Populations Végétales, CNRS UMR 8198, Université Lille1, F-59655 Villeneuve d'Ascq cedex, France.
Eric SchmittLaboratoire Génétique et Evolution des Populations Végétales, CNRS UMR 8198, Université Lille1, F-59655 Villeneuve d'Ascq cedex, France.
Vincent CastricLaboratoire Génétique et Evolution des Populations Végétales, CNRS UMR 8198, Université Lille1, F-59655 Villeneuve d'Ascq cedex, France.
Xavier VekemansLaboratoire Génétique et Evolution des Populations Végétales, CNRS UMR 8198, Université Lille1, F-59655 Villeneuve d'Ascq cedex, France.
Centre National de la Recherche Scientifique · FRLaboratoire de Génétique & Evolution des Populations Végétales · FRUniversité de Montpellier · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Self-incompatibility (SI) is a genetic system that prevents self-fertilization in many Angiosperms. Although plants from the Brassicaceae family present an apparently unique SI system that is ancestral to the family, investigations at the S-locus responsible for SI have been mostly limited to two distinct lineages (Brassica and Arabidopsis-Capsella, respectively). Here, we investigated SI in a third deep-branching lineage of Brassicaceae: the tribe Biscutelleae. By coupling sequencing of the SI gene responsible for pollen recognition (SRK) with phenotypic analyses based on controlled pollinations, we identified 20 SRK-like sequences functionally linked to 13 S-haplotypes in 21 individuals of Biscutella neustriaca and 220 seedlings. We found two genetic and phylogenetic features of SI in Biscutelleae that depart from patterns observed in the reference Arabidopsis clade: (1) SRK-like sequences cluster into two main phylogenetic lineages interspersed within the many SRK lineages of Arabidopsis; and (2) some SRK-like sequences are transmitted by linked pairs, suggesting local duplication within the S-locus. Strikingly, these features also were observed in the Brassica clade but probably evolved independently, as the two main SRK clusters in Biscutella are distinct from those in Brassica. In the light of our results and of what has been previously observed in other Brassicaceae, we discuss the ecological and evolutionary implications on SI plant populations of the high diversity and the complex dominance relationships we found at the S-locus in Biscutelleae.

Indexed as

Genes, PlantGenetic LociAmino Acid SubstitutionBrassicaceaeCluster AnalysisCrosses, GeneticEvolution, MolecularGene Expression Regulation, PlantGenetic VariationHaplotypesPhenotypePhylogenyPollinationPolymorphism, GeneticPosition-Specific Scoring MatricesSelection, GeneticBiscutelleaecontrolled crossesdominance/recessivitygenetics of sexself-incompatibilitySRK

Identifiers

PMID24939184
PMCPMC4065267
OpenAlexW2107160388

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.