Evidence map›Paper›PMID 24939058›Full record

ArticleNature communications2014

Cell cycle transition from S-phase to G1 in Caulobacter is mediated by ancestral virulence regulators.

Coralie Fumeaux, Sunish Kumar Radhakrishnan, Silvia Ardissone, Laurence Théraulaz, Antonio Frandi, Daniel Martins, Jutta Nesper, Sören Abel, Urs Jenal, Patrick H Viollier

Open access · hybridAbstract read
In one paragraph

Article in Nature communications, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
15.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 95 citations in OpenAlex.

  1. Article
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  6. A conservedMicrobiology (Reading, England) · 2025
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  8. Comparison of CcrM-dependent methylation inJournal of bacteriology · 2024
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  9. Comparison of CcrM-dependent methylation inbioRxiv : the preprint server for biology · 2024
    Article
  10. Article
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  12. TheJournal of bacteriology · 2023
    Article
  13. MucR fromInternational journal of molecular sciences · 2023
    Article
  14. ThebioRxiv : the preprint server for biology · 2023
    Article
  15. Review
  16. Review
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Coralie FumeauxDepartment Microbiology and Molecular Medicine, Faculty of Medicine/CMU, Institute of Genetics and Genomics in Geneva (iGE3), University of Geneva, Rue Michel Servet 1, 1211 Genève 4, Switzerland.
Sunish Kumar Radhakrishnan1] Department Microbiology and Molecular Medicine, Faculty of Medicine/CMU, Institute of Genetics and Genomics in Geneva (iGE3), University of Geneva, Rue Michel Servet 1, 1211 Genève 4, Switzerland [2].
Silvia ArdissoneDepartment Microbiology and Molecular Medicine, Faculty of Medicine/CMU, Institute of Genetics and Genomics in Geneva (iGE3), University of Geneva, Rue Michel Servet 1, 1211 Genève 4, Switzerland.
Laurence ThéraulazDepartment Microbiology and Molecular Medicine, Faculty of Medicine/CMU, Institute of Genetics and Genomics in Geneva (iGE3), University of Geneva, Rue Michel Servet 1, 1211 Genève 4, Switzerland.
Antonio FrandiDepartment Microbiology and Molecular Medicine, Faculty of Medicine/CMU, Institute of Genetics and Genomics in Geneva (iGE3), University of Geneva, Rue Michel Servet 1, 1211 Genève 4, Switzerland.
Daniel MartinsDepartment Microbiology and Molecular Medicine, Faculty of Medicine/CMU, Institute of Genetics and Genomics in Geneva (iGE3), University of Geneva, Rue Michel Servet 1, 1211 Genève 4, Switzerland.
Jutta NesperBiozentrum of the University of Basel, Klingelbergstrasse 50/70, 4056 Basel, Switzerland.
Sören Abel1] Biozentrum of the University of Basel, Klingelbergstrasse 50/70, 4056 Basel, Switzerland [2].
Urs JenalBiozentrum of the University of Basel, Klingelbergstrasse 50/70, 4056 Basel, Switzerland.
Patrick H ViollierDepartment Microbiology and Molecular Medicine, Faculty of Medicine/CMU, Institute of Genetics and Genomics in Geneva (iGE3), University of Geneva, Rue Michel Servet 1, 1211 Genève 4, Switzerland.
University of Geneva · CHUniversity of Basel · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Zinc-finger domain transcriptional regulators regulate a myriad of functions in eukaryotes. Interestingly, ancestral versions (MucR) from Alpha-proteobacteria control bacterial virulence/symbiosis. Whether virulence regulators can also control cell cycle transcription is unknown. Here we report that MucR proteins implement a hitherto elusive primordial S→G1 transcriptional switch. After charting G1-specific promoters in the cell cycle model Caulobacter crescentus by comparative ChIP-seq, we use one such promoter as genetic proxy to unearth two MucR paralogs, MucR1/2, as constituents of a quadripartite and homeostatic regulatory module directing the S→G1 transcriptional switch. Surprisingly, MucR orthologues that regulate virulence and symbiosis gene transcription in Brucella, Agrobacterium or Sinorhizobium support this S→G1 switch in Caulobacter. Pan-genomic ChIP-seq analyses in Sinorhizobium and Caulobacter show that this module indeed targets orthologous genes. We propose that MucR proteins and possibly other virulence regulators primarily control bacterial cell cycle (G1-phase) transcription, rendering expression of target (virulence) genes periodic and in tune with the cell cycle.

Indexed as

Models, BiologicalBacterial ProteinsBase Sequencebeta-GalactosidaseCaulobacterChromatin ImmunoprecipitationDimerizationElectrophoretic Mobility Shift AssayG1 PhaseGene Expression Regulation, BacterialImmunoblottingMolecular Sequence DataPromoter Regions, GeneticReal-Time Polymerase Chain ReactionRepressor ProteinsSequence Analysis, DNABacterial Proteinsbeta-GalactosidaseRepressor Proteins

Identifiers

PMID24939058
PMCPMC4083442
OpenAlexW1995164239

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.