Evidence map›Paper›PMID 24938409›Full record

ArticleDevelopmental biology2014

Functional characterization of Prickle2 and BBS7 identify overlapping phenotypes yet distinct mechanisms.

Xue Mei, Trudi A Westfall, Qihong Zhang, Val C Sheffield, Alexander G Bassuk, Diane C Slusarski

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 31 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Xue MeiDepartment of Biology, University of Iowa, Iowa City, IA 52242, USA.
Trudi A WestfallDepartment of Biology, University of Iowa, Iowa City, IA 52242, USA.
Qihong ZhangDepartment of Pediatrics, University of Iowa Carver College of Medicine, Iowa City, IA 52242, USA; Howard Hughes Medical Institute, University of Iowa Carver College of Medicine, Iowa City, IA 52242, USA.
Val C SheffieldDepartment of Pediatrics, University of Iowa Carver College of Medicine, Iowa City, IA 52242, USA; Howard Hughes Medical Institute, University of Iowa Carver College of Medicine, Iowa City, IA 52242, USA.
Alexander G BassukDepartment of Pediatrics, University of Iowa Carver College of Medicine, Iowa City, IA 52242, USA.
Diane C SlusarskiDepartment of Biology, University of Iowa, Iowa City, IA 52242, USA. Electronic address: diane-slusarski@uiowa.edu.
University of Iowa · US

Funding

Treatment of a Complex Retinal Degenerative SyndromeR01EY011298 · NEI · UNIVERSITY OF IOWA · PI SHEFFIELD, VAL C. · 1996 to 2017
$7.3M
Interdisciplinary approach to retinal disease gene identificationR01EY017168 · NEI · UNIVERSITY OF IOWA · PI SHEFFIELD, VAL C. · 2007 to 2017
$5.9M
Tissue Culture CoreP30DC010362 · NIDCD · UNIVERSITY OF IOWA · PI EBERL, DANIEL F, LOGSDON, JOHN M · 2010 to 2014
$2.0M
Evaluating PRICKLE Mutations in Human Epilepsy and in Animal ModelsR01NS064159 · NINDS · UNIVERSITY OF IOWA · PI BASSUK, ALEXANDER G · 2009 to 2013
$1.7M
Role of Neural Progenitor Cells in the Development of Neonatal HydrocephalusR01NS083543 · NINDS · UNIVERSITY OF IOWA · PI SHEFFIELD, VAL C. · 2013 to 2017
$1.6M
Wnt modulation as a treatment for Autism Spectrum DisordersR21MH100086 · NIMH · UNIVERSITY OF IOWA · PI BASSUK, ALEXANDER G · 2013 to 2014
$407k
NEI NIH HHS 5R01EY011298NEI NIH HHS 5R01EY017168NEI NIH HHS R01 EY011298NEI NIH HHS R01 EY017168NIDCD NIH HHS P30DC010362NIMH NIH HHS 1R21MH100086-01NIMH NIH HHS R21 MH100086NINDS NIH HHS 1R01NS064159-01A1NINDS NIH HHS R01 NS064159NINDS NIH HHS R01 NS083543
6 · The paper itself

Abstract

Ciliopathies are genetic disorders that are caused by dysfunctional cilia and affect multiple organs. One type of ciliopathy, Bardet-Biedl syndrome, is a rare disorder characterized by obesity, retinitis pigmentosa, polydactyly, mental retardation and susceptibility to cardiovascular diseases. The Wnt/Planar cell polarity (PCP) has been associated with cilia function and ciliogenesis in directing the orientation of cilia and basal bodies. Yet the exact relationship between PCP and ciliopathy is not well understood. Here, we examine interactions between a core PCP component, Prickle2 (Pk2), and a central BBS gene, Bbs7, using gene knockdown in the zebrafish. pk2 and bbs7 knockdown both disrupt the formation of a ciliated organ, the Kupffer׳s vesicle (KV), but do not display a synergistic interaction. By measuring cell polarity in the neural tube, we find that bbs7 activity is not required for Pk asymmetric localization. Moreover, BBS protein complex formation is preserved in the Pk2-deficient (Pk2(-/-)) mouse. Previously we reported an intracellular melanosome transport delay as a cardinal feature of reduced bbs gene activity. We find that pk2 knockdown suppresses bbs7-related retrograde transport delay. Similarly, knockdown of ift22, an anterograde intraflagellar transport component, also suppresses the bbs7-related retrograde delay. Notably, we find that pk2 knockdown larvae show a delay in anterograde transport. These data suggest a novel role for Pk2 in directional intracellular transport and our analyses show that PCP and BBS function independently, yet result in overlapping phenotypes when knocked down in zebrafish.

Indexed as

Adaptor Proteins, Signal TransducingAnalysis of VarianceAnimalsBardet-Biedl SyndromeBiological TransportCell MovementCell PolarityCiliaCytoskeletal ProteinsDNA PrimersImmunohistochemistryImmunoprecipitationIn Situ HybridizationLIM Domain ProteinsMembrane ProteinsMiceAdaptor Proteins, Signal TransducingBBS7 protein, mouseCytoskeletal ProteinsDNA PrimersLIM Domain ProteinsMembrane ProteinsMolecular ChaperonesMorpholinosPrickle2 protein, mouseBardet–Biedl syndromeCiliaIntracellular transportKupffer׳s vesiclePlanar cell polarityPrickle2Retinal neurogenesisZebrafish

Identifiers

PMID24938409
PMCPMC4114335
OpenAlexW2002033653

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.