Evidence map›Paper›PMID 24937567›Full record

ArticleAnalytical chemistry2014

Identification of virulence determinants in influenza viruses.

Pierre Negri, Joo Young Choi, Cheryl Jones, S Mark Tompkins, Ralph A Tripp, Richard A Dluhy

Abstract read
In one paragraph

Article in Analytical chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 28 citations in OpenAlex.

  1. Determination of lentiviral titer by surface enhanced Raman scattering.Analytical methods : advancing methods and applications · 2022
    Article
  2. Review
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Pierre NegriDepartment of Chemistry, University of Georgia , Athens, Georgia 30602 United States.
Joo Young Choi
Cheryl Jones
S Mark Tompkins
Ralph A Tripp
Richard A Dluhy
University of Georgia · US

Funding

Determination of Markers of High Pathogenicity in InfluenzaR01GM102546 · NIGMS · UNIVERSITY OF GEORGIA · PI DLUHY, RICHARD A. · 2012 to 2015
$1.1M
NIGMS NIH HHS GM102546NIGMS NIH HHS R01 GM102546PHS HHS HHSN26620070000C
6 · The paper itself

Abstract

To date there is no rapid method to screen for highly pathogenic avian influenza strains that may be indicators of future pandemics. We report here the first development of an oligonucleotide-based spectroscopic assay to rapidly and sensitively detect a N66S mutation in the gene coding for the PB1-F2 protein associated with increased virulence in highly pathogenic pandemic influenza viruses. 5'-Thiolated ssDNA oligonucleotides were employed as probes to capture RNA isolated from six influenza viruses, three having N66S mutations, two without the N66S mutation, and one deletion mutant not encoding the PB1-F2 protein. Hybridization was detected without amplification or labeling using the intrinsic surfaced-enhanced Raman spectrum of the DNA-RNA complex. Multivariate analysis identified target RNA binding from noncomplementary sequences with 100% sensitivity, 100% selectivity, and 100% correct classification in the test data set. These results establish that optical-based diagnostic methods are able to directly identify diagnostic indicators of virulence linked to highly pathogenic pandemic influenza viruses without amplification or labeling.

Indexed as

AnimalsDNA ProbesDNA, Single-StrandedDogsInfluenza A virusInfluenza A Virus, H5N1 SubtypeInfluenza A Virus, H5N2 SubtypeIn Situ HybridizationLeast-Squares AnalysisMadin Darby Canine Kidney CellsModels, BiologicalMutationNanotubesOligonucleotidesRNA, ViralSensitivity and SpecificityDNA ProbesDNA, Single-StrandedOligonucleotidesPB1-F2 protein, Influenza A virusRNA, ViralViral ProteinsVirulence Factors

Identifiers

PMID24937567
PMCPMC4116746
OpenAlexW2314547026

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.