Evidence map›Paper›PMID 24936600›Full record

ArticleAntimicrobial agents and chemotherapy2014

Comparison of daclatasvir resistance barriers on NS5A from hepatitis C virus genotypes 1 to 6: implications for cross-genotype activity.

Chunfu Wang, Lingling Jia, Donald R O'Boyle, Jin-Hua Sun, Karen Rigat, Lourdes Valera, Peter Nower, Xin Huang, Bernadette Kienzle, Susan Roberts and 2 more

Abstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Trial
  2. Article
  3. Review
  4. Observational
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Antimicrobial agents and chemotherapy · 2017
    Article
  13. Article
  14. Review
  15. Interferon-Free Treatments for Chronic Hepatitis C Genotype 1 Infection.Journal of clinical and translational hepatology · 2016
    Review
  16. Review
  17. Synergistic Activity of Combined NS5A Inhibitors.Antimicrobial agents and chemotherapy · 2015
    Article
  18. Review
  19. Hepatitis C Virus Treatment: Is It Possible To Cure All Hepatitis C Virus Patients?Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association · 2015
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Chunfu WangDepartment of Virology, Bristol-Myers Squibb Research and Development, Wallingford, Connecticut, USA chunfu.wang@bms.com.
Lingling JiaDepartment of Virology, Bristol-Myers Squibb Research and Development, Wallingford, Connecticut, USA.
Donald R O'BoyleDepartment of Virology, Bristol-Myers Squibb Research and Development, Wallingford, Connecticut, USA.
Jin-Hua SunDepartment of Virology, Bristol-Myers Squibb Research and Development, Wallingford, Connecticut, USA.
Karen RigatDepartment of Virology, Bristol-Myers Squibb Research and Development, Wallingford, Connecticut, USA.
Lourdes ValeraDepartment of Virology, Bristol-Myers Squibb Research and Development, Wallingford, Connecticut, USA.
Peter NowerDepartment of Virology, Bristol-Myers Squibb Research and Development, Wallingford, Connecticut, USA.
Xin HuangApplied Genomics, Bristol-Myers Squibb Research and Development, Hopewell, New Jersey, USA.
Bernadette KienzleApplied Genomics, Bristol-Myers Squibb Research and Development, Hopewell, New Jersey, USA.
Susan RobertsDepartment of Virology, Bristol-Myers Squibb Research and Development, Wallingford, Connecticut, USA.
Min GaoDepartment of Virology, Bristol-Myers Squibb Research and Development, Wallingford, Connecticut, USA.
Robert A FridellDepartment of Virology, Bristol-Myers Squibb Research and Development, Wallingford, Connecticut, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A comparison of the daclatasvir (DCV [BMS-790052]) resistance barrier on authentic or hybrid replicons containing NS5A from hepatitis C virus (HCV) genotypes 1 to 6 (GT-1 to -6) was completed using a replicon elimination assay. The data indicated that genotype 1b (GT-1b) has the highest relative resistance barrier and genotype 2a (GT-2a M31) has the lowest. The rank order of resistance barriers to DCV was 1b>4a≥5a>6a≅1a>2a JFH>3a>2a M31. Importantly, DCV in combination with a protease inhibitor (PI) eliminated GT-2a M31 replicon RNA at a clinically relevant concentration. Previously, we reported the antiviral activity and resistance profiles of DCV on HCV genotypes 1 to 4 evaluated in the replicon system. Here, we report the antiviral activity and resistance profiles of DCV against hybrid replicons with NS5A sequences derived from HCV GT-5a and GT-6a clinical isolates. DCV was effective against both GT-5a and -6a hybrid replicon cell lines (50% effective concentrations [EC50s] ranging from 3 to 7 pM for GT-5a, and 74 pM for GT-6a). Resistance selection identified amino acid substitutions in the N-terminal domain of NS5A. For GT-5a, L31F and L31V, alone or in combination with K56R, were the major resistance variants (EC50s ranging from 2 to 40 nM). In GT-6a, Q24H, L31M, P32L/S, and T58A/S were identified as resistance variants (EC50s ranging from 2 to 250 nM). The in vitro data suggest that DCV has the potential to be an effective agent for HCV genotypes 1 to 6 when used in combination therapy.

Indexed as

Amino Acid SubstitutionAntiviral AgentsCarbamatesDrug Resistance, ViralGenotypeHepacivirusImidazolesProtease InhibitorsPyrrolidinesRepliconRNA-Dependent RNA PolymeraseValineViral Nonstructural ProteinsAntiviral AgentsCarbamatesdaclatasvirImidazolesNS-5 protein, hepatitis C virusProtease InhibitorsPyrrolidinesRNA-Dependent RNA PolymeraseValineViral Nonstructural Proteins

Identifiers

PMID24936600
PMCPMC4135806

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.