Evidence map›Paper›PMID 24936516›Full record

ArticleMolecular genetics & genomic medicine2014

A rare sequence variant in intron 1 of THAP1 is associated with primary dystonia.

Satya R Vemula, Jianfeng Xiao, Yu Zhao, Robert W Bastian, Joel S Perlmutter, Brad A Racette, Randal C Paniello, Zbigniew K Wszolek, Ryan J Uitti, Jay A Van Gerpen and 9 more

Open access · goldAbstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.1field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
  3. Dystonia (Lausanne, Switzerland) · 2024
    Article
  4. Genetic screening in patients of Meige syndrome and blepharospasm.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2022
    Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Risk Factor Genes in Patients with Dystonia: A Comprehensive Review.Tremor and other hyperkinetic movements (New York, N.Y.) · 2018
    Review
  10. Article
  11. Article
  12. Clinical and demographic characteristics related to onset site and spread of cervical dystonia.Movement disorders : official journal of the Movement Disorder Society · 2016
    Article
  13. Article
  14. Article
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 11 institutions in 3 countries.

Satya R VemulaDepartments of Neurology and Anatomy & Neurobiology, University of Tennessee Health Science Center Memphis, Tennessee, 38163.
Jianfeng XiaoDepartments of Neurology and Anatomy & Neurobiology, University of Tennessee Health Science Center Memphis, Tennessee, 38163.
Yu ZhaoDepartments of Neurology and Anatomy & Neurobiology, University of Tennessee Health Science Center Memphis, Tennessee, 38163.
Robert W BastianBastian Voice Institute Downers Grove, Illinois.
Joel S PerlmutterDepartment of Neurology, Washington University School of Medicine St. Louis, Missouri.
Brad A RacetteDepartment of Neurology, Washington University School of Medicine St. Louis, Missouri.
Randal C PanielloDepartment of Otolaryngology-Head and Neck Surgery, Washington University School of Medicine St. Louis, Missouri.
Zbigniew K WszolekDepartment of Neurology, Mayo Clinic Jacksonville, Florida, 32224.
Ryan J UittiDepartment of Neurology, Mayo Clinic Jacksonville, Florida, 32224.
Jay A Van GerpenDepartment of Neurology, Mayo Clinic Jacksonville, Florida, 32224.
Peter HederaDepartment of Neurology, Vanderbilt University Nashville, Tennessee.
Daniel D TruongParkinson's & Movement Disorder Institute Fountain Valley, California, 92708.
Andrew BlitzerNew York Center for Voice and Swallowing Disorders New York, New York.
Monika RudzińskaDepartment of Neurology, Jagiellonian University Medical College in Krakow Kraków, Poland.
Dragana MomčilovićClinic for Child Neurology and Psychiatry, Medical Faculty University of Belgrade Belgrade, Serbia.
Hyder A JinnahDepartments of Neurology, Human Genetics, and Pediatrics, School of Medicine, Emory University Atlanta, Georgia, 30322.
Karen FreiDepartment of Neurology, Loma Linda University Health System Loma Linda, California, 92354.
Ronald F PfeifferDepartments of Neurology and Anatomy & Neurobiology, University of Tennessee Health Science Center Memphis, Tennessee, 38163.
Mark S LeDouxDepartments of Neurology and Anatomy & Neurobiology, University of Tennessee Health Science Center Memphis, Tennessee, 38163.
University of Tennessee Health Science Center · USWashington University in St. Louis · USJacksonville College · USBastian Voice Institute · USEmory University · USJagiellonian University · PLMayo Clinic in Florida · USParkinson's and Movement Disorder Institute · USUniversity Health System · USUniversity of Belgrade · RSVanderbilt University · US

Funding

Neuropathology CoreP50NS072187 · NINDS · MAYO CLINIC JACKSONVILLE · PI DICKSON, DENNIS WILLIAM · 2010 to 2017
$8.7M
INVESTIGATIONS OF DEMENTIA IN PARKINSON DISEASER01NS075321 · NINDS · WASHINGTON UNIVERSITY · PI CAMPBELL, MEGHAN C, PERLMUTTER, JOEL SYNES · 2011 to 2021
$8.2M
Dystonia CoalitionU54TR001456 · NCATS · EMORY UNIVERSITY · PI JINNAH, HYDER A · 2015 to 2016
$2.5M
Genetics and Biology of CIZ1 in Cervical DystoniaR01NS082296 · NINDS · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI LEDOUX, MARK S · 2013 to 2016
$1.3M
The Role of THAP1 in DystoniaR01NS069936 · NINDS · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI LEDOUX, MARK S · 2010 to 2013
$1.3M
NCATS NIH HHS U54 TR001456NINDS NIH HHS P50 NS072187NINDS NIH HHS R01 NS069936NINDS NIH HHS R01 NS075321NINDS NIH HHS R01 NS082296
6 · The paper itself

Abstract

Although coding variants in THAP1 have been causally associated with primary dystonia, the contribution of noncoding variants remains uncertain. Herein, we examine a previously identified Intron 1 variant (c.71+9C>A, rs200209986). Among 1672 subjects with mainly adult-onset primary dystonia, 12 harbored the variant in contrast to 1/1574 controls (P < 0.01). Dystonia classification included cervical dystonia (N = 3), laryngeal dystonia (adductor subtype, N = 3), jaw-opening oromandibular dystonia (N = 1), blepharospasm (N = 2), and unclassified (N = 3). Age of dystonia onset ranged from 25 to 69 years (mean = 54 years). In comparison to controls with no identified THAP1 sequence variants, the c.71+9C>A variant was associated with an elevated ratio of Isoform 1 (NM_018105) to Isoform 2 (NM_199003) in leukocytes. In silico and minigene analyses indicated that c.71+9C>A alters THAP1 splicing. Lymphoblastoid cells harboring the c.71+9C>A variant showed extensive apoptosis with relatively fewer cells in the G2 phase of the cell cycle. Differentially expressed genes from lymphoblastoid cells revealed that the c.71+9C>A variant exerts effects on DNA synthesis, cell growth and proliferation, cell survival, and cytotoxicity. In aggregate, these data indicate that THAP1 c.71+9C>A is a risk factor for adult-onset primary dystonia.

Indexed as

DystoniaDYT6intronic variantminigene assayTHAP1

Identifiers

PMID24936516
PMCPMC4049367
OpenAlexW2012821814

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.