Evidence map›Paper›PMID 24936515›Full record

ArticleMolecular genetics & genomic medicine2014

Novel IRF6 mutations in families with Van Der Woude syndrome and popliteal pterygium syndrome from sub-Saharan Africa.

Azeez Butali, Peter A Mossey, Wasiu L Adeyemo, Mekonen A Eshete, LauRen A Gaines, Dee Even, Ramat O Braimah, Babatunde S Aregbesola, Jennifer V Rigdon, Christian I Emeka and 11 more

Open access · goldAbstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
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  4. Loss of the epithelial transcription factor grhl3 leads to variably penetrant developmental phenotypes in zebrafish.Developmental dynamics : an official publication of the American Association of Anatomists · 2025
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  9. Open medicine (Warsaw, Poland) · 2023
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  10. Article
  11. Review
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  13. Article
  14. [Genetic analysis of a family of Van der Woude syndrome].Zhejiang da xue xue bao. Yi xue ban = Journal of Zhejiang University. Medical sciences · 2019
    Article
  15. Review
  16. Medical genetics and genomic medicine in Nigeria.Molecular genetics & genomic medicine · 2018
    Article
  17. Novel GREM1 Variations in Sub-Saharan African Patients With Cleft Lip and/or Cleft Palate.The Cleft palate-craniofacial journal : official publication of the American Cleft Palate-Craniofacial Association · 2018
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  18. Article
  19. The prevalence, penetrance, and expressivity of etiologicMolecular genetics & genomic medicine · 2017
    Article
  20. Genetics and genomics etiology of nonsyndromic orofacial clefts.Molecular genetics & genomic medicine · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 6 institutions in 4 countries.

Azeez ButaliDepartment of Oral Pathology, Radiology and Medicine, College of Dentistry, University of Iowa Iowa City, Iowa.
Peter A MosseyDepartment of Orthodontics, University of Dundee Dundee, Scotland.
Wasiu L AdeyemoCollege of Medicine, University of Lagos Lagos, Nigeria.
Mekonen A EsheteAddis Ababa University Addis Ababa, Ethiopia.
LauRen A GainesDepartment of Oral Pathology, Radiology and Medicine, College of Dentistry, University of Iowa Iowa City, Iowa.
Dee EvenDepartment of Oral Pathology, Radiology and Medicine, College of Dentistry, University of Iowa Iowa City, Iowa.
Ramat O BraimahObafemi Awolowo University Ile-Ife, Nigeria.
Babatunde S AregbesolaObafemi Awolowo University Ile-Ife, Nigeria.
Jennifer V RigdonDepartment of Oral Pathology, Radiology and Medicine, College of Dentistry, University of Iowa Iowa City, Iowa.
Christian I EmekaCollege of Medicine, University of Lagos Lagos, Nigeria.
Olutayo JamesCollege of Medicine, University of Lagos Lagos, Nigeria.
Mobolanle O OgunleweCollege of Medicine, University of Lagos Lagos, Nigeria.
Akinola L LadeindeCollege of Medicine, University of Lagos Lagos, Nigeria.
Fikre AbateAddis Ababa University Addis Ababa, Ethiopia.
Taye HailuAddis Ababa University Addis Ababa, Ethiopia.
Ibrahim MohammedAddis Ababa University Addis Ababa, Ethiopia.
Paul E GravemAddis Ababa University Addis Ababa, Ethiopia.
Milliard DeribewAddis Ababa University Addis Ababa, Ethiopia.
Mulualem GessesAddis Ababa University Addis Ababa, Ethiopia.
Adebowale A AdeyemoCenter for Research on Genomics and Global Health, National Human Genome Research Institute, National Institutes of Health Bethesda, Maryland.
Jeffrey C MurrayDepartment of Oral Pathology, Radiology and Medicine, College of Dentistry, University of Iowa Iowa City, Iowa.
Addis Ababa University · ETUniversity of Iowa · USUniversity of Lagos · NGObafemi Awolowo University · NGNational Institutes of Health · USUniversity of Dundee · GB

Funding

Extending the Phenotype of Nonsyndromic Orofacial CleftsR01DE016148 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MARAZITA, MARY L., WEINBERG, SETH M · 2004 to 2018
$19.7M
FaceBase Management and Coordination HubU01DE020057 · NIDCR · UNIVERSITY OF IOWA · PI MARAZITA, MARY L., MURRAY, JEFFREY C · 2009 to 2014
$8.9M
UI INITIATIVE FOR MINORITY STUDENT DEVELOPMENT PROGRAMR25GM058939 · NIGMS · UNIVERSITY OF IOWA · PI ADAMS-PHILLIPS, LORI C, FORBES, TORI · 1999 to 2021
$6.9M
Molecular Genetic Epidemiology of Cleft Lip and PalateR37DE008559 · NIDCR · UNIVERSITY OF IOWA · PI MURRAY, JEFFREY C · 2004 to 2013
$6.8M
MOLECULAR GENETIC EPIDEMIOLOGY OF CLEFT LIP AND PALATER01DE008559 · NIDCR · UNIVERSITY OF IOWA · PI MURRAY, JEFFREY C · 1988 to 2003
$1.5M
Genetic studies of nonsyndromic clefts in populations of African Descent.R00DE022378 · NIDCR · UNIVERSITY OF IOWA · PI BUTALI, AZEEZ · 2014 to 2016
$747k
Genetic studies of nonsyndromic clefts in populations of African Descent.K99DE022378 · NIDCR · UNIVERSITY OF IOWA · PI BUTALI, AZEEZ · 2012 to 2013
$252k
NIDCR NIH HHS K99 DE022378NIDCR NIH HHS R00 DE022378NIDCR NIH HHS R01 DE008559NIDCR NIH HHS R01 DE016148NIDCR NIH HHS R37 DE008559NIDCR NIH HHS U01 DE020057NIGMS NIH HHS R25 GM058939
6 · The paper itself

Abstract

Orofacial clefts (OFC) are complex genetic traits that are often classified as syndromic or nonsyndromic clefts. Currently, there are over 500 types of syndromic clefts in the Online Mendelian Inheritance in Man (OMIM) database, of which Van der Woude syndrome (VWS) is one of the most common (accounting for 2% of all OFC). Popliteal pterygium syndrome (PPS) is considered to be a more severe form of VWS. Mutations in the IRF6 gene have been reported worldwide to cause VWS and PPS. Here, we report studies of families with VWS and PPS in sub-Saharan Africa. We screened the DNA of eight families with VWS and one family with PPS from Nigeria and Ethiopia by Sanger sequencing of the most commonly affected exons in IRF6 (exons 3, 4, 7, and 9). For the VWS families, we found a novel nonsense variant in exon 4 (p.Lys66X), a novel splice-site variant in exon 4 (p.Pro126Pro), a novel missense variant in exon 4 (p.Phe230Leu), a previously reported splice-site variant in exon 7 that changes the acceptor splice site, and a known missense variant in exon 7 (p.Leu251Pro). A previously known missense variant was found in exon 4 (p.Arg84His) in the PPS family. All the mutations segregate in the families. Our data confirm the presence of IRF6-related VWS and PPS in sub-Saharan Africa and highlights the importance of screening for novel mutations in known genes when studying diverse global populations. This is important for counseling and prenatal diagnosis for high-risk families.

Indexed as

IRF6popliteal pterygium syndromesub-Saharan AfricaVan der Woude syndrome

Identifiers

PMID24936515
PMCPMC4049366
OpenAlexW2146097702

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.