Evidence map›Paper›PMID 24936208›Full record

ArticleInfectious agents and cancer2014

Systematic analysis of human oncogenic viruses in colon cancer revealed EBV latency in lymphoid infiltrates.

Loretta Fiorina, Mattia Ricotti, Alessandro Vanoli, Ombretta Luinetti, Elena Dallera, Roberta Riboni, Stefania Paolucci, Silvia Brugnatelli, Marco Paulli, Paolo Pedrazzoli and 2 more

Open access · goldAbstract read
In one paragraph

Article in Infectious agents and cancer, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it, 42 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Loretta FiorinaDepartment of Diagnostic Medicine, Molecular Virology, Fondazione IRCCS Policlinico San Matteo, Pavia, Italy.
Mattia RicottiDepartment of Onco-Hematology, Oncology Section, Fondazione IRCCS Policlinico San Matteo, V.le Camillo Golgi 19, 27100 Pavia, Italy.
Alessandro VanoliDepartment of Molecular Medicine, University of Pavia and Anatomic Pathology section, Fondazione IRCCS Policlinico San Matteo, Pavia, Italy.
Ombretta LuinettiDepartment of Molecular Medicine, University of Pavia and Anatomic Pathology section, Fondazione IRCCS Policlinico San Matteo, Pavia, Italy.
Elena DalleraDepartment of Molecular Medicine, University of Pavia and Anatomic Pathology section, Fondazione IRCCS Policlinico San Matteo, Pavia, Italy.
Roberta RiboniDepartment of Molecular Medicine, University of Pavia and Anatomic Pathology section, Fondazione IRCCS Policlinico San Matteo, Pavia, Italy.
Stefania PaolucciDepartment of Diagnostic Medicine, Molecular Virology, Fondazione IRCCS Policlinico San Matteo, Pavia, Italy.
Silvia BrugnatelliDepartment of Onco-Hematology, Oncology Section, Fondazione IRCCS Policlinico San Matteo, V.le Camillo Golgi 19, 27100 Pavia, Italy.
Marco PaulliDepartment of Molecular Medicine, University of Pavia and Anatomic Pathology section, Fondazione IRCCS Policlinico San Matteo, Pavia, Italy.
Paolo PedrazzoliDepartment of Onco-Hematology, Oncology Section, Fondazione IRCCS Policlinico San Matteo, V.le Camillo Golgi 19, 27100 Pavia, Italy.
Fausto BaldantiDepartment of Diagnostic Medicine, Molecular Virology, Fondazione IRCCS Policlinico San Matteo, Pavia, Italy.
Vittorio PerfettiDepartment of Onco-Hematology, Oncology Section, Fondazione IRCCS Policlinico San Matteo, V.le Camillo Golgi 19, 27100 Pavia, Italy.
Istituti di Ricovero e Cura a Carattere Scientifico · ITPoliclinico San Matteo Fondazione · ITUniversity of Pavia · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundEnvironmental factors may play a role in colon cancer. In this view, several studies investigated tumor samples for the presence of various viral DNA with conflicting results.

findingsWe undertook a systematic DNA analysis of 44 consecutive, prospectively collected primary tumor samples by real time and qualitative PCR for viruses of known or potential oncogenic role in humans, including polyomavirus (JCV, BKV, Merkel cell polyomavirus), HPV, HTLV, HHV-8 and EBV. Negative controls consisted of surgical resection margins. No evidence of genomic DNA fragments from tested virus were detected, except for EBV, which was found in a significant portion of tumors (23/44, 52%). Real-time PCR showed that EBV DNA was present at a highly variable content (median 258 copies in 10(5) cells, range 15-4837). Presence of EBV DNA had a trend to be associated with high lymphocyte infiltration (p = 0.06, χ2 test), and in situ hybridization with EBER1-2 probes revealed latency in a fraction of these lymphoid cells, with just a few scattered plasma cells positive for BZLF-1, an immediate early protein expressed during lytic replication. LMP-1 expression was undetectable by immunohistochemistry.

conclusionsThese results argue against a significant involvement of the tested oncogenic viruses in established colon cancer.

Indexed as

Colon cancerEBVOncogenic viruses

Identifiers

PMID24936208
PMCPMC4058445
OpenAlexW2123555020

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.