ArticlePloS one2014
Isolation and characterization of microsatellite markers and analysis of genetic diversity in Chinese jujube (Ziziphus jujuba Mill.).
Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
23 citing papers in PubMed, 61 citations in OpenAlex.
- Research Progress and Prospects of Molecular Marker Technology on Jujube Trees.Plants (Basel, Switzerland) · 2026Review
- Development and application of core collection, KASP markers and SNP-based DNA fingerprinting inFrontiers in plant science · 2026Article
- Genetic diversity evaluation ofFrontiers in plant science · 2024Article
- Multiple-Genome-Based Simple Sequence Repeat Is an Efficient and Successful Method in Genotyping and Classifying Different Jujube Germplasm Resources.Plants (Basel, Switzerland) · 2023Article
- Genotyping of Jujube (Plants (Basel, Switzerland) · 2023Article
- Assessment of genetic diversity and population structure in wild Ziziphus species from northwest India using SSR marker technique.Journal, genetic engineering & biotechnology · 2023Article
- Genetic analysis of mixed models of fruit sugar-acid fractions in a cross between jujube (Frontiers in plant science · 2023Article
- Genomic constitution and relationships ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2022Article
- The complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2022Article
- Agro-morphological and genetic diversity studies in Rice (Oryza sativa L.) germplasm using microsatellite markers.Molecular biology reports · 2021Article
- The genetic relationships of Indian jujube (Heliyon · 2020Article
- Genetic Diversity ofFrontiers in plant science · 2020Article
- Article
- An Integrated Characterization of Jujube (Food technology and biotechnology · 2019Article
- Transcriptome sequence analysis and mining of SSRs in Jhar Ber (Ziziphus nummularia (Burm.f.) Wight & Arn) under drought stress.Scientific reports · 2018Article
- Genetic Diversity, Population Structure, and Linkage Disequilibrium of a Core Collection ofFrontiers in plant science · 2017Article
- Article
- Identifying the genetic diversity, genetic structure and a core collection of Ziziphus jujuba Mill. var. jujuba accessions using microsatellite markers.Scientific reports · 2016Article
- Article
- Genomics and Evolution in Traditional Medicinal Plants: Road to a Healthier Life.Evolutionary bioinformatics online · 2015Review
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
10 authors at 2 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Chinese jujube (Ziziphus jujuba Mill, 2n = 2× = 24, Rhamnaceae) is an economically important Chinese native species. It has high nutritional value, and its medicinal properties have led to extensive use in traditional oriental medicine. The characterization of genotypes using molecular markers is important for genetic studies and plant breeding. However, few simple sequence repeat (SSR) markers are available for this species. In this study, 1,488 unique SSR clones were isolated from Z. jujuba 'Dongzao' using enriched genomic libraries coupled with a three-primer colony PCR screening strategy, yielding a high enrichment rate of 73.3%. Finally, 1,188 (80.87%) primer pairs were amplified successfully in the size expected for 'Dongzao'. A total of 350 primer pairs were further selected and evaluated for their ability to detect polymorphisms across a panel of six diverse cultivars; among these, 301 primer pairs detected polymorphisms, and the polymorphism information content (PIC) value across all loci ranged from 0.15 to 0.82, with an average of 0.52. An analysis of 76 major cultivars employed in Chinese jujube production using 31 primer pairs revealed comparatively high genetic diversity among these cultivars. Within-population differences among individuals accounted for 98.2% of the observed genetic variation. Neighbor-joining clustering divided the cultivars into three main groups, none of which correspond to major geographic regions, suggesting that the genetics and geographical origin of modern Chinese jujube cultivars might not be linked. The current work firstly reports the large-scale development of Chinese jujube SSR markers. The development of these markers and their polymorphic information represent a significant improvement in the available Chinese jujube genomic resources and will facilitate both genetic and breeding applications, further accelerating the development of new cultivars.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.