Evidence map›Paper›PMID 24932966›Full record

ArticleViruses2014

Engineered RNase P ribozymes effectively inhibit human cytomegalovirus gene expression and replication.

Zhu Yang, Gia-Phong Vu, Hua Qian, Yuan-Chuan Chen, Yu Wang, Michael Reeves, Ke Zen, Fenyong Liu

Abstract read
In one paragraph

Article in Viruses, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Progress and Prospects of Anti-HBV Gene Therapy Development.International journal of molecular sciences · 2015
    Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Zhu YangInstitute of Virology, School of Life Sciences, Nanjing University, Nanjing, Jiangsu 210093, China. nooney1986@163.com.
Gia-Phong VuProgram in Comparative Biochemistry, University of California, Berkeley, CA 94720, USA. giaphongvu@berkeley.edu.
Hua QianDepartment of Gynecology, People's Hospital of Taizhou, Taizhou, Jiangsu 225300, China. huaqian1965@hotmail.com.
Yuan-Chuan ChenProgram in Comparative Biochemistry, University of California, Berkeley, CA 94720, USA. yuchuan1022@berkeley.edu.
Yu WangTaizhou Institute of Virology, Taizhou, Jiangsu 225300, China. sin_angel@foxmail.com.
Michael ReevesSchool of Public Health, University of California, Berkeley, CA 94720, USA. mreeves@berkeley.edu.
Ke ZenInstitute of Virology, School of Life Sciences, Nanjing University, Nanjing, Jiangsu 210093, China. kzen@nju.edu.cn.
Fenyong LiuProgram in Comparative Biochemistry, University of California, Berkeley, CA 94720, USA. liu_fy@berkeley.edu.

Funding

RIBOZYMES FOR STUDIES AND TREATMENT OF HCMV INFECTIONSR01AI041927 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI LIU, FENYONG · 1997 to 2012
$3.7M
Human cytomegalovirus chromatin modifications in oral infectionR01DE023935 · NIDCR · UNIVERSITY OF CALIFORNIA BERKELEY · PI LIU, FENYONG · 2013 to 2017
$2.3M
Small RNA therapeutics for AIDS-associated infectionR01DE014842 · NIDCR · UNIVERSITY OF CALIFORNIA BERKELEY · PI LIU, FENYONG · 2002 to 2010
$2.2M
NIAID NIH HHS R01 AI041927NIAID NIH HHS R01-AI041927NIDCR NIH HHS R01 DE014842NIDCR NIH HHS R01-DE014842NIDCR NIH HHS R01 DE023935
6 · The paper itself

Abstract

RNase P ribozyme can be engineered to be a sequence-specific gene-targeting agent with promising application in both basic research and clinical settings. By using an in vitro selection system, we have previously generated RNase P ribozyme variants that have better catalytic activity in cleaving an mRNA sequence than the wild type ribozyme. In this study, one of the variants was used to target the mRNA encoding human cytomegalovirus (HCMV) essential transcription factor immediate-early protein 2 (IE2). The variant was able to cleave IE2 mRNA in vitro 50-fold better than the wild type ribozyme. A reduction of about 98% in IE2 expression and a reduction of 3500-fold in viral production was observed in HCMV-infected cells expressing the variant compared to a 75% reduction in IE2 expression and a 100-fold reduction in viral production in cells expressing the ribozyme derived from the wild type sequence. These results suggest that ribozyme variants that are selected to be highly active in vitro are also more effective in inhibiting the expression of their targets in cultured cells. Our study demonstrates that RNase P ribozyme variants are efficient in reducing HCMV gene expression and growth and are potentially useful for anti-viral therapeutic application.

Indexed as

Gene Expression Regulation, ViralVirus ReplicationCell LineCytomegalovirusCytomegalovirus InfectionsGene ExpressionHumansNucleic Acid ConformationRibonuclease PRNA, MessengerSubstrate SpecificityRibonuclease PRNA, Messenger

Identifiers

PMID24932966
PMCPMC4074932

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.