Evidence map›Paper›PMID 24932473›Full record

ArticlePloS one2014

Depletion of the aryl hydrocarbon receptor in MDA-MB-231 human breast cancer cells altered the expression of genes in key regulatory pathways of cancer.

Gennifer Goode, Siddharth Pratap, Sakina E Eltom

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 37 citations in OpenAlex.

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  13. Reactive oxygen species modulate macrophage immunosuppressive phenotype through the up-regulation of PD-L1.Proceedings of the National Academy of Sciences of the United States of America · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Gennifer GoodeDepartment of Biochemistry and Cancer Biology, Meharry Medical College, Nashville, Tennessee, United States of America.
Siddharth PratapMicorarray and Bioinformatics Core, Meharry Medical College, Nashville, Tennessee, United States of America.
Sakina E EltomDepartment of Biochemistry and Cancer Biology, Meharry Medical College, Nashville, Tennessee, United States of America.
Meharry Medical College · US

Funding

VITAMIN D DEFICIENCY AND INCREASED RISK OF UTERINE FIBROIDS IN AFRICAN AMERICANSG12RR003032 · NCRR · MEHARRY MEDICAL COLLEGE · PI LIU, BINDONG · 1985 to 2011
$27.4M
Meharry RCMI Program in Women's Health ResearchG12MD007586 · NIMHD · MEHARRY MEDICAL COLLEGE · PI HILDRETH, JAMES E · 2012 to 2016
$7.8M
The Aryl Hydrocarbon Receptor and Breast CancerSC1CA153326 · NCI · MEHARRY MEDICAL COLLEGE · PI ELTOM, SAKINA ELZEBAIR · 2010 to 2014
$1.8M
NCI NIH HHS SC1 CA153326NCI NIH HHS SC1-CA153326NCRR NIH HHS G12 RR003032NCRR NIH HHS G12-RR003032NIMHD NIH HHS G12 MD007586NIMHD NIH HHS G12-MD007586
6 · The paper itself

Abstract

The aryl hydrocarbon receptor (AhR), a transcription factor that is best known for its role in mediating the toxic responses elicited by poly aromatic hydrocarbons as well as many other environmental factors; is also involved in breast cancer progression. We previously reported that stable knockdown of AhR decreased the tumorigenic properties of the highly metastatic MDA-MB-231 breast cancer cell line; whereas ectopic overexpression of AhR was sufficient to transform immortalized human mammary epithelial cells to exhibit malignant phenotypes. In the present study we investigated the genes that are differentially regulated by AhR and are controlling cellular processes linked to breast cancer. We used Affymetrix Human GeneChip 1.0-ST whole transcriptome arrays to analyze alterations of gene expression resulting from stable AhR knockdown in the MDA-MB-231 breast cancer cell line. The expression of 144 genes was significantly altered with a ≥2.0-fold change and a multiple test corrected p-value ≤0.05, as a result of AhR knockdown. We demonstrate that AhR knockdown alters the expression of several genes known to be linked to cancer. These genes include those involved in tryptophan metabolism (KYNU), cell growth (MUC1 and IL8), cell survival (BIRC3 and BCL3), cell migration and invasion (S100A4 and ABI3), multi-drug resistance (ABCC3) and angiogenesis (VEGFA and CCL2). The identification of the genes and pathways affected by AhR depletion provides new insight into possible molecular events that could explain the reported phenotypic changes. In conclusion AhR knockdown alters the expression of genes known to enhance or inhibit cancer progression; tipping the balance towards a state that counteracts tumor progression.

Indexed as

Gene Expression ProfilingGene Expression Regulation, NeoplasticBiomarkers, TumorFemaleGene Regulatory NetworksHumansOligonucleotide Array Sequence AnalysisReal-Time Polymerase Chain ReactionReceptors, Aryl HydrocarbonReverse Transcriptase Polymerase Chain ReactionRNA, MessengerRNA, Small InterferingTriple Negative Breast NeoplasmsTumor Cells, CulturedBiomarkers, TumorReceptors, Aryl HydrocarbonRNA, MessengerRNA, Small Interfering

Identifiers

PMID24932473
PMCPMC4059751
OpenAlexW2034639083

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.