Evidence map›Paper›PMID 24930733›Full record

ArticleMolecular cell2014

The calcineurin signaling network evolves via conserved kinase-phosphatase modules that transcend substrate identity.

Aaron Goldman, Jagoree Roy, Bernd Bodenmiller, Stefanie Wanka, Christian R Landry, Ruedi Aebersold, Martha S Cyert

Abstract read
In one paragraph

Article in Molecular cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Inactivation of the High-Affinity CaInternational journal of molecular sciences · 2025
    Article
  6. Article
  7. Article
  8. Calcineurin targets that mediateProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  9. Dynamic phosphorylation of Hcm1 promotes fitness in chronic stress.bioRxiv : the preprint server for biology · 2025
    Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. The regulatory landscape of the yeast phosphoproteome.Nature structural & molecular biology · 2023
    Article
  17. Article
  18. Article
  19. Article
  20. A cellular atlas of calcineurin signaling.Biochimica et biophysica acta. Molecular cell research · 2023
    Review

15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Aaron Goldman *Department of Biology, Stanford University, Stanford, CA 94305, USA.
Jagoree Roy *Department of Biology, Stanford University, Stanford, CA 94305, USA.
Bernd BodenmillerInstitute of Molecular Life Sciences, University of Zürich, 8057 Zürich, Switzerland.
Stefanie WankaInstitute of Molecular Life Sciences, University of Zürich, 8057 Zürich, Switzerland.
Christian R LandryInstitut de Biologie Intégrative et des Systèmes, PROTEO, Département de Biologie, Université Laval, Québec G1V 0A6, Canada.
Ruedi AebersoldDepartment of Biology, Institute of Molecular Systems Biology, ETH Zürich, 8093 Zürich, Switzerland.
Martha S CyertDepartment of Biology, Stanford University, Stanford, CA 94305, USA.

Funding

Supplement to Enhance Wellness and Resiliency in the Graduate EnvironmentT32GM007276 · NIGMS · STANFORD UNIVERSITY · PI MORRISON, ASHBY J. · 1985 to 2023
$32.9M
YEAST PP2B PHOSPHATASES--ROLE IN PHEROMONE ADAPTATIONR01GM048729 · NIGMS · STANFORD UNIVERSITY · PI CYERT, MARTHA S. · 1993 to 2013
$5.4M
CIHR GMX-191597NIGMS NIH HHS GM-48728NIGMS NIH HHS R01 GM048729NIGMS NIH HHS T32 GM007276NIGMS NIH HHS T32-GM007276
6 · The paper itself

Abstract

To define a functional network for calcineurin, the conserved Ca(2+)/calmodulin-regulated phosphatase, we systematically identified its substrates in S. cerevisiae using phosphoproteomics and bioinformatics, followed by copurification and dephosphorylation assays. This study establishes new calcineurin functions and reveals mechanisms that shape calcineurin network evolution. Analyses of closely related yeasts show that many proteins were recently recruited to the network by acquiring a calcineurin-recognition motif. Calcineurin substrates in yeast and mammals are distinct due to network rewiring but, surprisingly, are phosphorylated by similar kinases. We postulate that corecognition of conserved substrate features, including phosphorylation and docking motifs, preserves calcineurin-kinase opposition during evolution. One example we document is a composite docking site that confers substrate recognition by both calcineurin and MAPK. We propose that conserved kinase-phosphatase pairs define the architecture of signaling networks and allow other connections between kinases and phosphatases to develop that establish common regulatory motifs in signaling networks.

Indexed as

Amino Acid MotifsAmino Acid SequenceBinding SitesCalcineurinConserved SequenceEvolution, MolecularGene Expression Regulation, FungalMitogen-Activated Protein KinasesMolecular Docking SimulationPhosphorylationPhylogenyProteomicsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal TransductionSubstrate SpecificityCalcineurinMitogen-Activated Protein KinasesSaccharomyces cerevisiae Proteins

Identifiers

PMID24930733
PMCPMC4127121

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.