Evidence map›Paper›PMID 24929528›Full record

ArticleNature chemical biology2014

DrugTargetSeqR: a genomics- and CRISPR-Cas9-based method to analyze drug targets.

Corynn Kasap, Olivier Elemento, Tarun M Kapoor

Abstract read
In one paragraph

Article in Nature chemical biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed.

  1. A Comprehensive Understanding ofCurrent issues in molecular biology · 2026
    Review
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  5. Expanding the CRISPR/Cas toolkit: applications in proteomics and theranostics.Frontiers in bioengineering and biotechnology · 2025
    Review
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6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Corynn KasapLaboratory of Chemistry and Cell Biology, The Rockefeller University, New York, New York, USA.
Olivier ElementoInstitute for Computational Biomedicine, Weill Cornell Medical College, New York, New York, USA.
Tarun M KapoorLaboratory of Chemistry and Cell Biology, The Rockefeller University, New York, New York, USA.

Funding

Weill Cornell/Rockefeller/Sloan-Kettering MST ProgramT32GM007739 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI HSU, KATHARINE C · 1985 to 2023
$51.1M
Studying chromosome function using chemical biologyR01GM098579 · NIGMS · ROCKEFELLER UNIVERSITY · PI KAPOOR, TARUN M. · 2011 to 2018
$3.3M
NIGMS NIH HHS GM98579NIGMS NIH HHS R01 GM098579NIGMS NIH HHS T32 GM007739NIGMS NIH HHS T32GM007739
6 · The paper itself

Abstract

To identify physiological targets of drugs and bioactive small molecules, we developed an approach, named DrugTargetSeqR, which combines high-throughput sequencing, computational mutation discovery and clustered regularly interspaced short palindromic repeats (CRISPR)-Cas9-based genome editing. We applied this approach to ispinesib and YM155, drugs that have undergone clinical trials as anticancer agents, and uncovered mechanisms of action and identified genetic and epigenetic mechanisms likely to cause drug resistance in human cancer cells.

Indexed as

Clustered Regularly Interspaced Short Palindromic RepeatsAntineoplastic AgentsBenzamidesCell Line, TumorDrug Resistance, NeoplasmEndonucleasesEpigenesis, GeneticGenomeHigh-Throughput Nucleotide SequencingHumansImidazolesKinesinsMolecular Targeted TherapyMutationNaphthoquinonesQuinazolinesAntineoplastic AgentsBenzamidesEndonucleasesImidazolesispinesibKinesinsNaphthoquinonesQuinazolinessepantronium

Identifiers

PMID24929528
PMCPMC4123312

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.