Evidence map›Paper›PMID 24928538›Full record

ArticleThe protein journal2014

Purification, characterization, and crystallization of Crocodylus siamensis hemoglobin.

Jinda Jandaruang, Jaruwan Siritapetawee, Chomphunuch Songsiriritthigul, Sutthidech Preecharram, Taoka Azuma, Apisak Dhiravisit, Yoshihiro Fukumori, Sompong Thammasirirak

Abstract read
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Article in The protein journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Jinda JandaruangDepartment of Biochemistry, Faculty of Science, Khon Kaen University, Khon Kaen, 40002, Thailand.
Jaruwan Siritapetawee
Chomphunuch Songsiriritthigul
Sutthidech Preecharram
Taoka Azuma
Apisak Dhiravisit
Yoshihiro Fukumori
Sompong Thammasirirak
Khon Kaen University · THKanazawa University · JPKasetsart University · THSuranaree University of Technology · THSynchrotron Light Research Institute · TH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Crocodylus siamensis hemoglobin was purified by a size exclusion chromatography, Sephacryl S-100 with buffer containing dithiothreitol. The purified Hb was dissociated to be two forms (α chain and β chain) which observed by SDS-PAGE, indicated that the C. siamensis Hb was an unpolymerized form. The unpolymerized Hb (composed of two α chains and two β chains) showed high oxygen affinity at 3.13 mmHg (P(50)) and 1.96 (n value), and a small Bohr effect (δH(+) = -0.29) at a pH of 6.9-8.4. Adenosine triphosphate did not affect the oxygenation properties, whereas bicarbonate ions strongly depressed oxygen affinity. Crude C. siamensis Hb solutions were showed high O(2) affinity at P(50) of 2.5 mmHg which may assure efficient utilization of the lung O(2) reserve during breath holding and diving. The purified Hbs were changed to cyanmethemoglobin forms prior crystallization. Rod- and plate-shaped crystals were obtained by the sitting-drop vapor-diffusion method at 5 °C using equal volumes of protein solution (37 mg/ml) and reservoir [10-13 % (w/v) PEG 4000, with 0.1 M Tris buffer in present of 0.2 M MgCl(2)·6H(2)O] solution at a pH of 7.0-8.5.

Indexed as

Adenosine TriphosphateAlligators and CrocodilesAmino Acid SequenceAnimalsBicarbonatesCrystallizationHemoglobinsHydrogen-Ion ConcentrationMolecular Sequence DataPolymerizationProtein StabilitySequence AlignmentAdenosine TriphosphateBicarbonatesHemoglobins

Identifiers

PMID24928538
OpenAlexW2071430967

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.