Evidence map›Paper›PMID 24927729›Full record

ArticleJournal of lipid research2014

Structural characterization of human cholesterol 7α-hydroxylase.

Wolfram Tempel, Irina Grabovec, Farrell MacKenzie, Yaroslav V Dichenko, Sergey A Usanov, Andrei A Gilep, Hee-Won Park, Natallia Strushkevich

Open access · hybridAbstract read
In one paragraph

Article in Journal of lipid research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Mammalian Cells Engineered To Produce New Steroids.Chembiochem : a European journal of chemical biology · 2018
    Article
  7. Review
  8. Recent Structural Insights into Cytochrome P450 Function.Trends in pharmacological sciences · 2016
    Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Wolfram TempelStructural Genomics Consortium, University of Toronto, Toronto, Ontario, M5G 1L7, Canada.
Irina GrabovecInstitute of Bioorganic Chemistry NAS of Belarus, Minsk, 220141 Belarus.
Farrell MacKenzieStructural Genomics Consortium, University of Toronto, Toronto, Ontario, M5G 1L7, Canada.
Yaroslav V DichenkoInstitute of Bioorganic Chemistry NAS of Belarus, Minsk, 220141 Belarus.
Sergey A UsanovInstitute of Bioorganic Chemistry NAS of Belarus, Minsk, 220141 Belarus.
Andrei A GilepInstitute of Bioorganic Chemistry NAS of Belarus, Minsk, 220141 Belarus.
Hee-Won ParkDepartment of Biochemistry and Molecular Biology, Tulane University School of Medicine, New Orleans, LA 70112.
Natallia StrushkevichInstitute of Bioorganic Chemistry NAS of Belarus, Minsk, 220141 Belarus.
Institute of Bioorganic Chemistry · BYStructural Genomics Consortium · CATulane University · USUniversity of Toronto · CA

Funding

X-RAY STRUCTURE OF RIFM PROTEIN FROM THE BIOSYNTHESIS PATHWAY OF THE ANSAMYCIN AP41RR012408 · NCRR · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI ALLEN, KAREN A · 1998 to 2011
$32.2M
Macromolecular Crystallography at the National Synchrotron Light SourceP41GM103473 · NIGMS · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI SWEET, ROBERT M · 2012 to 2013
$4.9M
NCI NIH HHS Y1-CO-1020NCRR NIH HHS P41 RR012408NCRR NIH HHS P41RR012408NIGMS NIH HHS P41 GM103473NIGMS NIH HHS P41GM103473NIGMS NIH HHS Y1-GM-1104Wellcome Trust 092809Wellcome Trust 092809/Z/10/Z
6 · The paper itself

Abstract

Hepatic conversion to bile acids is a major elimination route for cholesterol in mammals. CYP7A1 catalyzes the first and rate-limiting step in classic bile acid biosynthesis, converting cholesterol to 7α-hydroxycholesterol. To identify the structural determinants that govern the stereospecific hydroxylation of cholesterol, we solved the crystal structure of CYP7A1 in the ligand-free state. The structure-based mutation T104L in the B' helix, corresponding to the nonpolar residue of CYP7B1, was used to obtain crystals of complexes with cholest-4-en-3-one and with cholesterol oxidation product 7-ketocholesterol (7KCh). The structures reveal a motif of residues that promote cholest-4-en-3-one binding parallel to the heme, thus positioning the C7 atom for hydroxylation. Additional regions of the binding cavity (most distant from the access channel) are involved to accommodate the elongated conformation of the aliphatic side chain. Structural complex with 7KCh shows an active site rigidity and provides an explanation for its inhibitory effect. Based on our previously published data, we proposed a model of cholesterol abstraction from the membrane by CYP7A1 for metabolism. CYP7A1 structural data provide a molecular basis for understanding of the diversity of 7α-hydroxylases, on the one hand, and cholesterol-metabolizing enzymes adapted for their specific activity, on the other hand.

Indexed as

Amino Acid SequenceAmino Acid SubstitutionCatalytic DomainCholesterol 7-alpha-HydroxylaseCrystallography, X-RayEnzyme InhibitorsHumansHydrogen BondingHydroxylationKetocholesterolsModels, MolecularMolecular Sequence DataProtein BindingProtein Structure, Secondary7-ketocholesterolCholesterol 7-alpha-HydroxylaseCYP7A1 protein, humanEnzyme InhibitorsKetocholesterolscytochrome P450oxysterolsX-ray crystallography CYP7A1

Identifiers

PMID24927729
PMCPMC4617357
OpenAlexW2314592947

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.