Evidence map›Paper›PMID 24927528›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Pituitary tumor-transforming gene 1 regulates the patterning of retinal mosaics.

Patrick W Keeley, Cuiqi Zhou, Lu Lu, Robert W Williams, Shlomo Melmed, Benjamin E Reese

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Frontiers in genetics · 2020
    Article
  6. Article
  7. Article
  8. Article
  9. Gene expression in retinal ischemic post-conditioning.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2018
    Article
  10. Article
  11. Review
  12. Article
  13. Genomic control of neuronal demographics in the retina.Progress in retinal and eye research · 2016
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 4 countries.

Patrick W KeeleyNeuroscience Research Institute,Department of Molecular, Cellular, Developmental Biology, and.
Cuiqi ZhouPituitary Center, Department of Medicine, Cedars-Sinai Medical Center, Los Angeles, CA 90048;
Lu LuDepartment of Anatomy and Neurobiology, University of Tennessee Health Science Center, Memphis TN 38120; andJiangsu Key Laboratory of Neuroregenertion, Nantong University, Nantong 226001, China.
Robert W WilliamsDepartment of Anatomy and Neurobiology, University of Tennessee Health Science Center, Memphis TN 38120; and.
Shlomo MelmedPituitary Center, Department of Medicine, Cedars-Sinai Medical Center, Los Angeles, CA 90048;
Benjamin E ReeseNeuroscience Research Institute,Department of Psychological and Brain Sciences, University of California, Santa Barbara, CA 93106; breese@psych.ucsb.edu.
Cedars-Sinai Medical Center · USNeuroscience Institute · ITNantong University · CNUniversity of Tennessee Health Science Center · US

Funding

Development of Retinal Bipolar CellsR01EY019968 · NEI · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI REESE, BENJAMIN E · 2010 to 2023
$4.9M
Mechanisms of Pituitary TumorigenesisR01CA075979 · NCI · CEDARS-SINAI MEDICAL CENTER · PI MELMED, SHLOMO · 1999 to 2012
$3.5M
Genetic Modulators of GlaucomaR01EY021200 · NEI · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI JABLONSKI, MONICA M · 2011 to 2022
$3.2M
INIA-STRESS: Informatics and Analysis CoreU01AA016662 · NIAAA · VIRGINIA COMMONWEALTH UNIVERSITY · PI WILLIAMS, ROBERT W. · 2007 to 2016
$2.9M
NCI NIH HHS CA75979NCI NIH HHS R01 CA075979NEI NIH HHS EY19968NEI NIH HHS EY21200NEI NIH HHS R01 EY019968NEI NIH HHS R01 EY021200NIAAA NIH HHS U01 AA016662
6 · The paper itself

Abstract

Neurons are commonly organized as regular arrays within a structure, and their patterning is achieved by minimizing the proximity between like-type cells, but molecular mechanisms regulating this process have, until recently, been unexplored. We performed a forward genetic screen using recombinant inbred (RI) strains derived from two parental A/J and C57BL/6J mouse strains to identify genomic loci controlling spacing of cholinergic amacrine cells, which is a subclass of retinal interneuron. We found conspicuous variation in mosaic regularity across these strains and mapped a sizeable proportion of that variation to a locus on chromosome 11 that was subsequently validated with a chromosome substitution strain. Using a bioinformatics approach to narrow the list of potential candidate genes, we identified pituitary tumor-transforming gene 1 (Pttg1) as the most promising. Expression of Pttg1 was significantly different between the two parental strains and correlated with mosaic regularity across the RI strains. We identified a seven-nucleotide deletion in the Pttg1 promoter in the C57BL/6J mouse strain and confirmed a direct role for this motif in modulating Pttg1 expression. Analysis of Pttg1 KO mice revealed a reduction in the mosaic regularity of cholinergic amacrine cells, as well as horizontal cells, but not in two other retinal cell types. Together, these results implicate Pttg1 in the regulation of homotypic spacing between specific types of retinal neurons. The genetic variant identified creates a binding motif for the transcriptional activator protein 1 complex, which may be instrumental in driving differential expression of downstream processes that participate in neuronal spacing.

Indexed as

Amacrine CellsAnimalsBase SequenceCholinergic NeuronsEye ProteinsGene Expression RegulationMiceMice, KnockoutPromoter Regions, GeneticSecurinSequence DeletionEye ProteinsPTTG1 protein, mouseSecurinnearest neighbor distancequantitative trait locusrecombinant inbred miceregularity index

Identifiers

PMID24927528
PMCPMC4078852
OpenAlexW2021081649

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.