Evidence map›Paper›PMID 24924332›Full record

ArticleG3 (Bethesda, Md.)2014

Pattern of mutation rates in the germline of Drosophila melanogaster males from a large-scale mutation screening experiment.

Jian-Jun Gao, Xue-Rong Pan, Jing Hu, Li Ma, Jian-Min Wu, Ye-Lin Shao, Shi-Meng Ai, Shu-Qun Liu, Sara A Barton, Ronny C Woodruff and 2 more

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Jian-Jun GaoLaboratory for Conservation and Utilization of Bio-Resources, Yunnan University, Kunming, Yunnan, China.
Xue-Rong PanLaboratory for Conservation and Utilization of Bio-Resources, Yunnan University, Kunming, Yunnan, China.
Jing HuLaboratory for Conservation and Utilization of Bio-Resources, Yunnan University, Kunming, Yunnan, China.
Li MaLaboratory for Conservation and Utilization of Bio-Resources, Yunnan University, Kunming, Yunnan, China.
Jian-Min WuLaboratory for Conservation and Utilization of Bio-Resources, Yunnan University, Kunming, Yunnan, China.
Ye-Lin ShaoLaboratory for Conservation and Utilization of Bio-Resources, Yunnan University, Kunming, Yunnan, China.
Shi-Meng AiLaboratory for Conservation and Utilization of Bio-Resources, Yunnan University, Kunming, Yunnan, China.
Shu-Qun LiuLaboratory for Conservation and Utilization of Bio-Resources, Yunnan University, Kunming, Yunnan, China.
Sara A BartonDivision of Biostatistics and Human Genetics Center, School of Public Health, The University of Texas at Houston, Houston, Texas.
Ronny C WoodruffDepartment of Biological Sciences, Bowling Green State University, Bowling Green, Ohio.
Ya-Ping ZhangLaboratory for Conservation and Utilization of Bio-Resources, Yunnan University, Kunming, Yunnan, China State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan, China.
Yun-Xin FuLaboratory for Conservation and Utilization of Bio-Resources, Yunnan University, Kunming, Yunnan, China Department of Biological Sciences, Bowling Green State University, Bowling Green, Ohio yunxin.fu@uth.tmc.edu.ORCID http://orcid.org/0000-0002-1224-4075

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The sperm or eggs of sexual organisms go through a series of cell divisions from the fertilized egg; mutations can occur at each division. Mutations in the lineage of cells leading to the sperm or eggs are of particular importance because many such mutations may be shared by somatic tissues and also may be inherited, thus having a lasting consequence. For decades, little has been known about the pattern of the mutation rates along the germline development. Recently it was shown from a small portion of data that resulted from a large-scale mutation screening experiment that the rates of recessive lethal or nearly lethal mutations differ dramatically during the germline development of Drosophila melanogaster males. In this paper the full data set from the experiment and its analysis are reported by taking advantage of a recent methodologic advance. By analyzing the mutation patterns with different levels of recessive lethality, earlier published conclusions based on partial data are found to remain valid. Furthermore, it is found that for most nearly lethal mutations, the mutation rate at the first cell division is even greater than previous thought compared with those at other divisions. There is also some evidence that the mutation rate at the second division decreases rapidly but is still appreciably greater than those for the rest of the cleavage stage. The mutation rate at spermatogenesis is greater than late cleavage and stem-cell stages, but there is no evidence that rates are different among the five cell divisions of the spermatogenesis. We also found that a modestly biased sampling, leading to slightly more primordial germ cells after the eighth division than those reported in the literature, provides the best fit to the data. These findings provide conceptual and numerical basis for exploring the consequences of differential mutation rates during individual development.

Indexed as

Germ-Line MutationAnimalsDrosophila melanogasterMaleMutation RateSpermatogenesisSpermatozoacell coalescentDrosophila melanogastergermline mutation ratelikelihood inference

Identifiers

PMID24924332
PMCPMC4132180

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.