Evidence map›Paper›PMID 24921344›Full record

ArticleOptics express2014

Estimation of the number of fluorescent end-members for quantitative analysis of multispectral FLIM data.

Omar Gutierrez-Navarro, Daniel U Campos-Delgado, Edgar R Arce-Santana, Kristen C Maitland, Shuna Cheng, Joey Jabbour, Bilal Malik, Rodrigo Cuenca, Javier A Jo

Abstract read
In one paragraph

Article in Optics express, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Extended Blind End-member and Abundance Extraction for Biomedical Imaging Applications.IEEE access : practical innovations, open solutions · 2019
    Article
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Omar Gutierrez-Navarro
Daniel U Campos-Delgado
Edgar R Arce-Santana
Kristen C Maitland
Shuna Cheng
Joey Jabbour
Bilal Malik
Rodrigo Cuenca
Javier A Jo

Funding

Morphological and Molecular Imaging System for in vivo Atherosclerosis ResearchR01HL111361 · NHLBI · TEXAS ENGINEERING EXPERIMENT STATION · PI APPLEGATE, BRIAN E. · 2012 to 2016
$1.7M
Multiresolution FLIM and Reflectance Confocal Microscopy to Detect DysplasiaR01CA138653 · NCI · TEXAS ENGINEERING EXPERIMENT STATION · PI MAITLAND, KRISTEN C. · 2010 to 2014
$1.5M
NCI NIH HHS R01 CA138653NCI NIH HHS R01CA138653NHLBI NIH HHS R01HL11136NHLBI NIH HHS R01 HL111361
6 · The paper itself

Abstract

Multispectral fluorescence lifetime imaging (m-FLIM) can potentially allow identifying the endogenous fluorophores present in biological tissue. Quantitative description of such data requires estimating the number of components in the sample, their characteristic fluorescent decays, and their relative contributions or abundances. Unfortunately, this inverse problem usually requires prior knowledge about the data, which is seldom available in biomedical applications. This work presents a new methodology to estimate the number of potential endogenous fluorophores present in biological tissue samples from time-domain m-FLIM data. Furthermore, a completely blind linear unmixing algorithm is proposed. The method was validated using both synthetic and experimental m-FLIM data. The experimental m-FLIM data include in-vivo measurements from healthy and cancerous hamster cheek-pouch epithelial tissue, and ex-vivo measurements from human coronary atherosclerotic plaques. The analysis of m-FLIM data from in-vivo hamster oral mucosa identified healthy from precancerous lesions, based on the relative concentration of their characteristic fluorophores. The algorithm also provided a better description of atherosclerotic plaques in term of their endogenous fluorophores. These results demonstrate the potential of this methodology to provide quantitative description of tissue biochemical composition.

Indexed as

AlgorithmsAnimalsCricetinaeHumansImage Processing, Computer-AssistedMicroscopy, FluorescencePlaque, AtheroscleroticRegression Analysis

Identifiers

PMID24921344
PMCPMC4086288

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.