Evidence map›Paper›PMID 24920970›Full record

ArticleRice (New York, N.Y.)2014

Quantitative trait locus analysis of resistance to panicle blast in the rice cultivar Miyazakimochi.

Takeaki Ishihara, Yuriko Hayano-Saito, Shinichi Oide, Kaworu Ebana, Nghia Tuan La, Keiko Hayashi, Taketo Ashizawa, Fumihiko Suzuki, Shinzo Koizumi

Open access · goldAbstract read
In one paragraph

Article in Rice (New York, N.Y.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Understanding the Dynamics of Blast Resistance in Rice-Journal of fungi (Basel, Switzerland) · 2022
    Review
  8. Article
  9. Identification and fine mapping ofMolecular breeding : new strategies in plant improvement · 2021
    Article
  10. Article
  11. Article
  12. Article
  13. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Takeaki IshiharaNational Agricultural Research Center, National Agriculture and Food Research Organization, 3-1-1 Kannondai, Tsukuba 305-8666, Ibaraki, Japan.
Yuriko Hayano-SaitoNational Agricultural Research Center, National Agriculture and Food Research Organization, 3-1-1 Kannondai, Tsukuba 305-8666, Ibaraki, Japan.
Shinichi OideNational Agricultural Research Center, National Agriculture and Food Research Organization, 3-1-1 Kannondai, Tsukuba 305-8666, Ibaraki, Japan ; Present address: Molecular Microbiology and Biotechnology group, Research Institute of Innovative Technology for the Earth, 9-2 Kizugawadai, Kizugawa 619-0292, Kyoto, Japan.
Kaworu EbanaNational Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba 305-8602, Ibaraki, Japan.
Nghia Tuan LaNational Plant Resources Center, An Khanh, Hoai Duc Hanoi, Vietnam.
Keiko HayashiNational Agricultural Research Center, National Agriculture and Food Research Organization, 3-1-1 Kannondai, Tsukuba 305-8666, Ibaraki, Japan.
Taketo AshizawaNational Agricultural Research Center, National Agriculture and Food Research Organization, 3-1-1 Kannondai, Tsukuba 305-8666, Ibaraki, Japan.
Fumihiko SuzukiNational Agricultural Research Center, National Agriculture and Food Research Organization, 3-1-1 Kannondai, Tsukuba 305-8666, Ibaraki, Japan.
Shinzo KoizumiNational Agricultural Research Center, National Agriculture and Food Research Organization, 3-1-1 Kannondai, Tsukuba 305-8666, Ibaraki, Japan ; Present address: Technical Adviser, Tsukuba International Center, Japan International Cooperation Agency, 3-6 Koyadai, Tsukuba 305-0074, Ibaraki, Japan.
National Agriculture and Food Research Organization · JPInstitute of Agrobiological Sciences · JPJapan International Cooperation Agency · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRice blast is a destructive disease caused by Magnaporthe oryzae, and it has a large impact on rice production worldwide. Compared with leaf blast resistance, our understanding of panicle blast resistance is limited, with only one panicle blast resistance gene, Pb1, isolated so far. The japonica cultivar Miyazakimochi shows resistance to panicle blast, yet the genetic components accounting for this resistance remain to be determined.

resultsIn this study, we evaluated the panicle blast resistance of populations derived from a cross between Miyazakimochi and the Bikei 22 cultivar, which is susceptible to both leaf and panicle blast. The phenotypic analyses revealed no correlation between panicle blast resistance and leaf blast resistance. Quantitative trait locus (QTL) analysis of 158 recombinant inbred lines using 112 developed genome-wide and 35 previously reported polymerase chain reaction (PCR) markers revealed the presence of two QTLs conferring panicle blast resistance in Miyazakimochi: a major QTL, qPbm11, on chromosome 11; and a minor QTL, qPbm9, on chromosome 9. To clarify the contribution of these QTLs to panicle blast resistance, 24 lines homozygous for each QTL were selected from 2,818 progeny of a BC2F7 backcrossed population, and characterized for disease phenotypes. The panicle blast resistance of the lines harboring qPbm11 was very similar to the resistant donor parental cultivar Miyazakimochi, whereas the contribution of qPbm9 to the resistance was small. Genotyping of the BC2F7 individuals highlighted the overlap between the qPbm11 region and a locus of the panicle blast resistance gene, Pb1. Reverse transcriptase PCR analysis revealed that the Pb1 transcript was absent in the panicles of Miyazakimochi, demonstrating that qPbm11 is a novel genetic component of panicle blast resistance.

conclusionsThis study revealed that Miyazakimochi harbors a novel panicle blast resistance controlled mainly by the major QTL qPbm11. qPbm11 is distinct from Pb1 and could be a genetic source for breeding panicle blast resistance, and will improve understanding of the molecular basis of host resistance to panicle blast.

Indexed as

Magnaporthe oryzaeOryza sativa LPanicle blast resistanceQTL

Identifiers

PMID24920970
PMCPMC4052777
OpenAlexW2115303634

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.