Evidence map›Paper›PMID 24920796›Full record

ArticleJournal of virology2014

Locking and blocking the viral landscape of an alphavirus with neutralizing antibodies.

Jason Porta, Joyce Jose, John T Roehrig, Carol D Blair, Richard J Kuhn, Michael G Rossmann

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 52 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Jason PortaDepartment of Biological Sciences, Purdue University, West Lafayette, Indiana, USA.
Joyce JoseDepartment of Biological Sciences, Purdue University, West Lafayette, Indiana, USA.
John T RoehrigDivision of Vector-Borne Infectious Diseases, Centers for Disease Control, Fort Collins, Colorado, USA.
Carol D BlairDepartment of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, Colorado, USA.
Richard J KuhnDepartment of Biological Sciences, Purdue University, West Lafayette, Indiana, USA.
Michael G RossmannDepartment of Biological Sciences, Purdue University, West Lafayette, Indiana, USA mr@purdue.edu.
Purdue University West Lafayette · USCenters for Disease Control and Prevention · USColorado State University · US

Funding

Vascular stabilization as a broad theraprutic platform for biodefenseU54AI065357 · NIAID · COLORADO STATE UNIVERSITY-FORT COLLINS · PI LODMELL, J. STEPHEN · 2005 to 2013
$77.5M
Structural Studies of TogavirusesR01AI095366 · NIAID · PURDUE UNIVERSITY · PI KUHN, RICHARD J. · 2012 to 2023
$6.8M
MOLECULAR BASIS OF ALPHAVIRUS ASSEMBLYR01GM056279 · NIGMS · PURDUE UNIVERSITY WEST LAFAYETTE · PI KUHN, RICHARD J. · 1997 to 2014
$3.7M
Structural investigations of the alphaviral lifecycleF32AI106149 · NIAID · PURDUE UNIVERSITY · PI PORTA, JASON C · 2014 to 2016
$169k
NIAID NIH HHS F32 AI106149NIAID NIH HHS R01 AI095366NIAID NIH HHS U54 AI065357NIGMS NIH HHS R01 GM056279
6 · The paper itself

Abstract

unlabelledAlphaviruses are serious, sometimes lethal human pathogens that belong to the family Togaviridae. The structures of human Venezuelan equine encephalitis virus (VEEV), an alphavirus, in complex with two strongly neutralizing antibody Fab fragments (F5 and 3B4C-4) have been determined using a combination of cryo-electron microscopy and homology modeling. We characterize these monoclonal antibody Fab fragments, which are known to abrogate VEEV infectivity by binding to the E2 (envelope) surface glycoprotein. Both of these antibody Fab fragments cross-link the surface E2 glycoproteins and therefore probably inhibit infectivity by blocking the conformational changes that are required for making the virus fusogenic. The F5 Fab fragment cross-links E2 proteins within one trimeric spike, whereas the 3B4C-4 Fab fragment cross-links E2 proteins from neighboring spikes. Furthermore, F5 probably blocks the receptor-binding site, whereas 3B4C-4 sterically hinders the exposure of the fusion loop at the end of the E2 B-domain. IMPORTANCE: Alphaviral infections are transmitted mainly by mosquitoes. Venezuelan equine encephalitis virus (VEEV) is an alphavirus with a wide distribution across the globe. No effective vaccines exist for alphaviral infections. Therefore, a better understanding of VEEV and its associated neutralizing antibodies will help with the development of effective drugs and vaccines.

Indexed as

Antibodies, NeutralizingAntibodies, ViralComputer SimulationCryoelectron MicroscopyEncephalitis Virus, Venezuelan EquineImmunoglobulin Fab FragmentsMacromolecular SubstancesModels, MolecularProtein BindingViral Envelope ProteinsAntibodies, NeutralizingAntibodies, ViralImmunoglobulin Fab FragmentsMacromolecular SubstancesViral Envelope Proteins

Identifiers

PMID24920796
PMCPMC4136364
OpenAlexW2163513953

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.