Evidence map›Paper›PMID 24920114›Full record

ArticleJournal of the Royal Society, Interface2014

A computational method to differentiate normal individuals, osteoarthritis and rheumatoid arthritis patients using serum biomarkers.

Bryan J Heard, Joshua M Rosvold, Marvin J Fritzler, Hani El-Gabalawy, J Preston Wiley, Roman J Krawetz

Open access · bronzeAbstract read
In one paragraph

Article in Journal of the Royal Society, Interface, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 2 pooled it
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 2 syntheses or guidelines pooled it, 48 citations in OpenAlex.

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  16. Machine Learning in Rheumatic Diseases.Clinical reviews in allergy & immunology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Bryan J HeardMcCaig Institute for Bone and Joint Health, University of Calgary, Calgary, Alberta, Canada Department of Surgery, University of Calgary, Calgary, Alberta, Canada.
Joshua M RosvoldMcCaig Institute for Bone and Joint Health, University of Calgary, Calgary, Alberta, Canada Department of Civil Engineering, Faculty of Engineering, University of Calgary, Calgary, Alberta, Canada.
Marvin J FritzlerMcCaig Institute for Bone and Joint Health, University of Calgary, Calgary, Alberta, Canada.
Hani El-GabalawyArthritis Centre, University of Manitoba, Winnipeg, Manitoba, Canada.
J Preston WileySports Medicine Centre, Faculty of Kinesiology, University of Calgary, Calgary, Alberta, Canada.
Roman J KrawetzMcCaig Institute for Bone and Joint Health, University of Calgary, Calgary, Alberta, Canada Department of Anatomy and Cell Biology, University of Calgary, Calgary, Alberta, Canada rkrawetz@ucalgary.ca.
University of Calgary · CAAlberta Bone and Joint Health Institute · CAUniversity of Manitoba · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The objective of this study was to develop a method for categorizing normal individuals (normal, n = 100) as well as patients with osteoarthritis (OA, n = 100), and rheumatoid arthritis (RA, n = 100) based on a panel of inflammatory cytokines expressed in serum samples. Two panels of inflammatory proteins were used as training sets in the construction of two separate artificial neural networks (ANNs). The first training set consisted of all proteins (38 in total) and the second consisted of only the significantly different proteins expressed (12 in total) between at least two patient groups. Both ANNs obtained high levels of sensitivity and specificity, with the first and second ANN each diagnosing 100% of test set patients correctly. These results were then verified by re-investigating the entire dataset using a decision tree algorithm. We show that ANNs can be used for the accurate differentiation between serum samples of patients with OA, a diagnosed RA patient comparator cohort and normal/control cohort. Using neural network and systems biology approaches to manage large datasets derived from high-throughput proteomics should be further explored and considered for diagnosing diseases with complex pathologies.

Indexed as

AdultAlgorithmsArthritis, RheumatoidBiomarkersCytokinesDiagnosis, Computer-AssistedFemaleHumansMaleMiddle AgedNeural Networks, ComputerOsteoarthritisPattern Recognition, AutomatedReference ValuesReproducibility of ResultsSensitivity and SpecificityBiomarkersCytokinesartificial neural networkcytokinesdiagnosticmachine learningosteoarthritisserum

Identifiers

PMID24920114
PMCPMC4208376
OpenAlexW2135579011

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.