Evidence map›Paper›PMID 24920110›Full record

ArticleJournal of the Royal Society, Interface2014

Quantitative analyses of the plant cytoskeleton reveal underlying organizational principles.

David Breuer, Alexander Ivakov, Arun Sampathkumar, Florian Hollandt, Staffan Persson, Zoran Nikoloski

Abstract read
In one paragraph

Article in Journal of the Royal Society, Interface, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. System-wide organization of actin cytoskeleton determines organelle transport in hypocotyl plant cells.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

David BreuerSystems Biology and Mathematical Modeling, Max Planck Institute of Molecular Plant Physiology, Am Muehlenberg 1, Potsdam 14476, Germany.
Alexander IvakovPlant Cell Walls, Max Planck Institute of Molecular Plant Physiology, Am Muehlenberg 1, Potsdam 14476, Germany.
Arun SampathkumarSainsbury Laboratory, University of Cambridge, Bateman Street, Cambridge CB2 1LR, UK.
Florian HollandtSystems Biology and Mathematical Modeling, Max Planck Institute of Molecular Plant Physiology, Am Muehlenberg 1, Potsdam 14476, Germany.
Staffan PerssonPlant Cell Walls, Max Planck Institute of Molecular Plant Physiology, Am Muehlenberg 1, Potsdam 14476, Germany ARC Centre of Excellence in Plant Cell Walls, School of Botany, University of Melbourne, Parkville, Victoria 3010, Australia.
Zoran NikoloskiSystems Biology and Mathematical Modeling, Max Planck Institute of Molecular Plant Physiology, Am Muehlenberg 1, Potsdam 14476, Germany nikoloski@mpimp-golm.mpg.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The actin and microtubule (MT) cytoskeletons are vital structures for cell growth and development across all species. While individual molecular mechanisms underpinning actin and MT dynamics have been intensively studied, principles that govern the cytoskeleton organization remain largely unexplored. Here, we captured biologically relevant characteristics of the plant cytoskeleton through a network-driven imaging-based approach allowing us to quantitatively assess dynamic features of the cytoskeleton. By introducing suitable null models, we demonstrate that the plant cytoskeletal networks exhibit properties required for efficient transport, namely, short average path lengths and high robustness. We further show that these advantageous features are maintained during temporal cytoskeletal rearrangements. Interestingly, man-made transportation networks exhibit similar properties, suggesting general laws of network organization supporting diverse transport processes. The proposed network-driven analysis can be readily used to identify organizational principles of cytoskeletons in other organisms.

Indexed as

Models, BiologicalActin CytoskeletonArabidopsisComputer SimulationMicrotubulescomplex networkscytoskeletal networkscytoskeletal transportorganizational principlesplant cell walls

Identifiers

PMID24920110
PMCPMC4208369

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.