Evidence map›Paper›PMID 24917611›Full record

ArticleMolecular & cellular proteomics : MCP2014

Diversity within the O-linked protein glycosylation systems of acinetobacter species.

Nichollas E Scott, Rachel L Kinsella, Alistair V G Edwards, Martin R Larsen, Sucharita Dutta, Julian Saba, Leonard J Foster, Mario F Feldman

Abstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Review
  2. Glycoproteomic and proteomic analysis ofMicrobiology spectrum · 2024
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  8. Article
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  10. BonA frommBio · 2021
    Article
  11. Article
  12. Article
  13. Genomic and Phenotypic Analyses ofFrontiers in microbiology · 2020
    Article
  14. Article
  15. Loss ofmSphere · 2019
    Article
  16. Article
  17. Review
  18. Article
  19. Disrupted Synthesis of a Di-Journal of bacteriology · 2019
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Nichollas E ScottFrom the ‡Centre for High-Throughput Biology, University of British Columbia, Vancouver, BC, V6T 1Z4, Canada;
Rachel L Kinsella§Alberta Glycomics Centre and Department of Biological Sciences, University of Alberta, Edmonton, AB, T6G 2E9, Canada;
Alistair V G Edwards¶Protein Research Group, Department of Biochemistry and Molecular Biology, University of Southern Denmark, Odense, 5000, Denmark;
Martin R Larsen¶Protein Research Group, Department of Biochemistry and Molecular Biology, University of Southern Denmark, Odense, 5000, Denmark;
Sucharita Dutta‖Thermo Fisher Scientific, San Jose, California 95134.
Julian Saba‖Thermo Fisher Scientific, San Jose, California 95134.
Leonard J FosterFrom the ‡Centre for High-Throughput Biology, University of British Columbia, Vancouver, BC, V6T 1Z4, Canada;
Mario F Feldman§Alberta Glycomics Centre and Department of Biological Sciences, University of Alberta, Edmonton, AB, T6G 2E9, Canada; mfeldman@ualberta.ca.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The opportunistic human pathogen Acinetobacter baumannii is a concern to health care systems worldwide because of its persistence in clinical settings and the growing frequency of multiple drug resistant infections. To combat this threat, it is necessary to understand factors associated with disease and environmental persistence of A. baumannii. Recently, it was shown that a single biosynthetic pathway was responsible for the generation of capsule polysaccharide and O-linked protein glycosylation. Because of the requirement of these carbohydrates for virulence and the non-template driven nature of glycan biogenesis we investigated the composition, diversity, and properties of the Acinetobacter glycoproteome. Utilizing global and targeted mass spectrometry methods, we examined 15 strains and found extensive glycan diversity in the O-linked glycoproteome of Acinetobacter. Comparison of the 26 glycoproteins identified revealed that different A. baumannii strains target similar protein substrates, both in characteristics of the sites of O-glycosylation and protein identity. Surprisingly, glycan micro-heterogeneity was also observed within nearly all isolates examined demonstrating glycan heterogeneity is a widespread phenomena in Acinetobacter O-linked glycosylation. By comparing the 11 main glycoforms and over 20 alternative glycoforms characterized within the 15 strains, trends within the glycan utilized for O-linked glycosylation could be observed. These trends reveal Acinetobacter O-linked glycosylation favors short (three to five residue) glycans with limited branching containing negatively charged sugars such as GlcNAc3NAcA4OAc or legionaminic/pseudaminic acid derivatives. These observations suggest that although highly diverse, the capsule/O-linked glycan biosynthetic pathways generate glycans with similar characteristics across all A. baumannii.

Indexed as

AcinetobacterBacterial ProteinsChromatography, LiquidGlycopeptidesGlycosylationPolysaccharidesTandem Mass SpectrometryBacterial ProteinsGlycopeptidesPolysaccharides

Identifiers

PMID24917611
PMCPMC4159654

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.