Evidence map›Paper›PMID 24917141›Full record

ArticleInvestigative ophthalmology & visual science2014

Association of LOXL1 polymorphisms with pseudoexfoliation, glaucoma, intraocular pressure, and systemic diseases in a Greek population. The Thessaloniki eye study.

Eleftherios Anastasopoulos, Anne L Coleman, M Roy Wilson, Janet S Sinsheimer, Fei Yu, Sokratis Katafigiotis, Panayiota Founti, Angeliki Salonikiou, Theofanis Pappas, Archimidis Koskosas and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 36 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Association ofInternational journal of ophthalmology · 2018
    Article
  8. Article
  9. Article
  10. Article
  11. Pseudoexfoliation syndrome at a Singapore eye clinic.Clinical ophthalmology (Auckland, N.Z.) · 2015
    Article
  12. One Year of Glaucoma Research in Review-2013 to 2014.Asia-Pacific journal of ophthalmology (Philadelphia, Pa.)
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Eleftherios AnastasopoulosDepartment of Ophthalmology, School of Medicine, Aristotle University of Thessaloniki, Thessaloniki, Greece.
Anne L ColemanCenter for Eye Epidemiology, Jules Stein Eye Institute, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, California, United States.
M Roy WilsonSchool of Medicine, Wayne State University, Detroit, Michigan, United States.
Janet S SinsheimerDepartment of Human Genetics, Department of Biomathematics, David Geffen School of Medicine at UCLA and Department of Biostatistics, UCLA School of Public Health, California, United States.
Fei YuCenter for Eye Epidemiology, Jules Stein Eye Institute, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, California, United States.
Sokratis KatafigiotisLaboratory of General Biology, School of Medicine, Aristotle University of Thessaloniki, Thessaloniki, Greece.
Panayiota FountiDepartment of Ophthalmology, School of Medicine, Aristotle University of Thessaloniki, Thessaloniki, Greece.
Angeliki SalonikiouDepartment of Ophthalmology, School of Medicine, Aristotle University of Thessaloniki, Thessaloniki, Greece.
Theofanis PappasDepartment of Ophthalmology, School of Medicine, Aristotle University of Thessaloniki, Thessaloniki, Greece.
Archimidis KoskosasDepartment of Ophthalmology, School of Medicine, Aristotle University of Thessaloniki, Thessaloniki, Greece.
Theodora KatopodiLaboratory of General Biology, School of Medicine, Aristotle University of Thessaloniki, Thessaloniki, Greece.
Alexandros LambropoulosLaboratory of General Biology, School of Medicine, Aristotle University of Thessaloniki, Thessaloniki, Greece.
Fotis TopouzisDepartment of Ophthalmology, School of Medicine, Aristotle University of Thessaloniki, Thessaloniki, Greece.
Aristotle University of Thessaloniki · GRDoheny Eye Institute · USMichigan United · USUniversity of California, Los Angeles · US

Funding

STATISTICAL METHODS FOR GENE MAPPINGR01GM053275 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LANGE, KENNETH L · 1995 to 2019
$9.3M
NIGMS NIH HHS GM053275NIGMS NIH HHS R01 GM053275
6 · The paper itself

Abstract

purposeTo investigate the association of the two single-nucleotide polymorphisms (SNPs) in the lysyl oxidase-like 1 (LOXL1) gene with pseudoexfoliation syndrome (PEX), pseudoexfoliative glaucoma (PEXG), and primary open-angle glaucoma (POAG) in a Greek population-based setting, from the Thessaloniki Eye study.

methodsA total of 233 subjects with successful DNA extraction, PCR amplification, and genotyping were included in the genetic analysis of G153D and R141L SNPs of LOXL1 gene and classified into four groups: controls (n = 93); subjects with PEX (n = 40); POAG (n = 66); and PEXG (n = 34). Multinomial logistic regression was used to test their association with LOXL1 SNPs with adjustment for covariates. The association of LOXL1 with IOP (in untreated subjects) and with systemic diseases was explored.

resultsBoth LOXL1 SNPs were present in high frequencies in controls and cases. The G153D was strongly associated with both PEX (odds ratio [OR] = 23.2, P = 0.003 for allele G) and PEXG (OR = 24.75, P = 0.003 for allele G) and was not associated with POAG (P = 0.451). In contrast, the R141L was not associated with PEX (P = 0.81), PEXG (P = 0.063), or POAG (P = 0.113). No association of the G153D with either intraocular pressure (IOP) or systemic diseases was found.

conclusionsIn the Thessaloniki Eye Study, the G153D SNP of LOXL1 gene was strongly associated with both PEX and PEXG, whereas the R141L was not associated. No association of the LOXL1 with IOP or with systemic diseases was found. These findings further support the hypothesis that the LOXL1 gene contributes to onset of PEXG through PEX. Gene variants of LOXL1 do not help to identify those with PEX at increased risk for glaucoma development.

Indexed as

Intraocular PressurePolymorphism, GeneticPopulation SurveillanceAgedAllelesAmino Acid OxidoreductasesCross-Sectional StudiesDNAEthnicityExfoliation SyndromeFemaleGenetic Predisposition to DiseaseGenotypeGlaucoma, Open-AngleGreeceHumansAmino Acid OxidoreductasesDNALOXL1 protein, humanLOXL1pseudoexfoliationpseudoexfoliative glaucoma

Identifiers

PMID24917141
PMCPMC4095722
OpenAlexW2320692419

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.