ArticleGenome biology2014
Mapping-by-sequencing accelerates forward genetics in barley.
Article in Genome biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.
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Who cites it
68 citing papers in PubMed.
- Comparative transcriptome analysis reveals candidate gene for flowering time QTL HvHeading in barley.BMC plant biology · 2025Article
- CLAVATA signalling shapes barley inflorescence by controlling activity and determinacy of shoot meristem and rachilla.Nature communications · 2025Article
- NAVIP: Unraveling the influence of neighboring small sequence variants on functional impact prediction.PLoS computational biology · 2025Article
- MADS-box encoding gene Tunicate1 positively controls maize yield by increasing leaf number above the ear.Nature communications · 2024Article
- A pipeline for identification of causal mutations in barley identifies Xantha-j as the chlorophyll synthase gene.Plant physiology · 2024Article
- A guide to barley mutants.Hereditas · 2024Review
- Advances in genome sequencing and artificially induced mutation provides new avenues for cotton breeding.Frontiers in plant science · 2024Review
- Article
- Integrating BSA-Seq with RNA-Seq Reveals a Novel Fasciated Ear5 Mutant in Maize.International journal of molecular sciences · 2023Article
- Characterization of a barley (Frontiers in plant science · 2023Article
- Plant and pathogen genomics: essential approaches for stem rust resistance gene stacks in wheat.Frontiers in plant science · 2023Review
- A reference-guided TILLING by amplicon-sequencing platform supports forward and reverse genetics in barley.Plant communications · 2022Article
- Mapping-by-Sequencing Reveals Genomic Regions Associated with Seed Quality Parameters inGenes · 2022Article
- Cloning the barley nec3 disease lesion mimic mutant using complementation by sequencing.The plant genome · 2022Article
- The Genetic Complexity of Type-IV Trichome Development Reveals the Steps towards an Insect-Resistant Tomato.Plants (Basel, Switzerland) · 2022Article
- The barley mutant multiflorus2.b reveals quantitative genetic variation for new spikelet architecture.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Article
- Review
- Genome sequencing identified novel mechanisms underlying virescent mutation in upland cotton Gossypiuma hirsutum.BMC genomics · 2021Article
- Genomics and breeding innovations for enhancing genetic gain for climate resilience and nutrition traits.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Review
- Regulation of the plastochron by three many-noded dwarf genes in barley.PLoS genetics · 2021Article
8 more citing papers are in PubMed but not listed here.
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Authors and funding
9 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Mapping-by-sequencing has emerged as a powerful technique for genetic mapping in several plant and animal species. As this resequencing-based method requires a reference genome, its application to complex plant genomes with incomplete and fragmented sequence resources remains challenging. We perform exome sequencing of phenotypic bulks of a mapping population of barley segregating for a mutant phenotype that increases the rate of leaf initiation. Read depth analysis identifies a candidate gene, which is confirmed by the analysis of independent mutant alleles. Our method illustrates how the genomic resources of barley together with exome resequencing can underpin mapping-by-sequencing.
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