Evidence map›Paper›PMID 24916859›Full record

ArticleCurrent genetics2014

The complete mitochondrial genome sequence of Brassica oleracea and analysis of coexisting mitotypes.

Yoshiyuki Tanaka, Mizue Tsuda, Keita Yasumoto, Toru Terachi, Hiroshi Yamagishi

Abstract readComparative Study
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In one paragraph

Article in Current genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

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3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Complete mitogenome and phylogenetic analysis ofMitochondrial DNA. Part B, Resources · 2025
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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Yoshiyuki TanakaFaculty of Life Sciences, Kyoto Sangyo University, Motoyama, Kamigamo, Kita, Kyoto, 603-8555, Japan, yoshi-tanaka@cc.okayama-u.ac.jp.
Mizue Tsuda
Keita Yasumoto
Toru Terachi
Hiroshi Yamagishi

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The complete mitochondrial genome sequences of Brassica species have provided insight into inter- and intraspecific variation of plant mitochondrial genomes. However, the size of mitochondrial genome sequenced for Brassica oleracea hitherto does not match to its physical mapping data. This fact led us to investigate B. oleracea mitochondrial genome in detail. Here we report novel B. oleracea mitochondrial genome, derived from var. capitata, a cabbage cultivar ''Fujiwase''. The genome was assembled into a 219,952-bp circular sequence that is comparable to the mitochondrial genomes of other Brassica species (ca. 220-232 kb). This genome contained 34 protein-coding genes, 3 rRNA genes and 17 tRNA genes. Due to absence of a large repeat (140 kb), the mitochondrial genome of ''Fujiwase'' is clearly smaller than the previously reported mitochondrial genome of B. oleracea accession ''08C717'' (360 kb). In both mitotypes, all genes were identical, except cox2-2, which was present only in the Fujiwase type. At least two rearrangement events via large and small repeat sequences have contributed to the structural differences between the two mitotypes. PCR-based marker analysis revealed that the Fujiwase type is predominant, whereas the 08C717 type coexists at low frequency in all B. oleracea cultivars examined. Intraspecific variations in the mitochondrial genome in B. oleracea may occur because of heteroplasmy, coexistence of different mitotypes within an individual, and substoichiometric shifting. Our data indicate that the Fujiwase-type genome should be used as the representative genome of B. oleracea.

Indexed as

BrassicaDNA, MitochondrialDNA, PlantGenome, MitochondrialGenome, PlantMitochondriaSequence Analysis, DNADNA, MitochondrialDNA, Plant

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.