Evidence map›Paper›PMID 24916657›Full record

ArticleJournal of molecular evolution2014

Genetic code evolution started with the incorporation of glycine, followed by other small hydrophilic amino acids.

Harold S Bernhardt, Wayne M Patrick

Abstract readLetter
PubMed Publisher
In one paragraph

Article in Journal of molecular evolution, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Article
  5. On the Evolutionary History of the Twenty Encoded Amino Acids.Chemistry (Weinheim an der Bergstrasse, Germany) · 2022
    Review
  6. Evolution of the genetic code.Transcription · 2021
    Review
  7. Evolution of the genetic code; Evidence from serine codon use disparity inProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Ribosome Structure, Function, and Early Evolution.International journal of molecular sciences · 2018
    Review
  13. Phenotypic Graphs and Evolution Unfold the Standard Genetic Code as the Optimal.Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life · 2018
    Article
  14. Article
  15. On the Uniqueness of the Standard Genetic Code.Life (Basel, Switzerland) · 2017
    Article
  16. Article
  17. Origins and Early Evolution of the tRNA Molecule.Life (Basel, Switzerland) · 2015
    Review
  18. Article
  19. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors.

Harold S BernhardtDepartment of Biochemistry, University of Otago, PO Box 56, Dunedin, 9054, New Zealand, harold.bernhardt@otago.ac.nz.
Wayne M Patrick

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We propose that glycine was the first amino acid to be incorporated into the genetic code, followed by serine, aspartic and/or glutamic acid-small hydrophilic amino acids that all have codons in the bottom right-hand corner of the standard genetic code table. Because primordial ribosomal synthesis is presumed to have been rudimentary, this stage would have been characterized by the synthesis of short, water-soluble peptides, the first of which would have comprised polyglycine. Evolution of the code is proposed to have occurred by the duplication and mutation of tRNA sequences, which produced a radiation of codon assignment outwards from the bottom right-hand corner. As a result of this expansion, we propose a trend from small hydrophilic to hydrophobic amino acids, with selection for longer polypeptides requiring a hydrophobic core for folding and stability driving the incorporation of hydrophobic amino acids into the code.

Indexed as

Evolution, MolecularGenetic CodeAmino AcidsGlycineHydrophobic and Hydrophilic InteractionsAmino AcidsGlycine

Identifiers

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.