Evidence map›Paper›PMID 24914968›Full record

ArticleActa crystallographica. Section D, Biological crystallography2014

A point mutation in the [2Fe-2S] cluster binding region of the NAF-1 protein (H114C) dramatically hinders the cluster donor properties.

Sagi Tamir, Yael Eisenberg-Domovich, Andrea R Conlan, Jason T Stofleth, Colin H Lipper, Mark L Paddock, Ron Mittler, Patricia A Jennings, Oded Livnah, Rachel Nechushtai

Open access · bronzeAbstract read
In one paragraph

Article in Acta crystallographica. Section D, Biological crystallography, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. CISD3/MiNT is required for complex I function, mitochondrial integrity, and skeletal muscle maintenance.Proceedings of the National Academy of Sciences of the United States of America · 2024
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  3. Review
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  8. The two redox states of the human NEET proteins' [2Fe-2S] clusters.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2021
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  9. Article
  10. Article
  11. Article
  12. Review
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  14. The unique fold and lability of the [2Fe-2S] clusters of NEET proteins mediate their key functions in health and disease.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2018
    Review
  15. Article
  16. Structure of the human monomeric NEET protein MiNT and its role in regulating iron and reactive oxygen species in cancer cells.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  17. Article
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  19. Article
  20. Breast cancer tumorigenicity is dependent on high expression levels of NAF-1 and the lability of its Fe-S clusters.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Sagi TamirThe Alexander Silberman Life Science Institute and the Wolfson Centre for Applied Structural Biology, The Hebrew University of Jerusalem, Edmond J. Safra Campus at Givat Ram, Jerusalem 91904, Israel.
Yael Eisenberg-DomovichThe Alexander Silberman Life Science Institute and the Wolfson Centre for Applied Structural Biology, The Hebrew University of Jerusalem, Edmond J. Safra Campus at Givat Ram, Jerusalem 91904, Israel.
Andrea R ConlanDepartments of Chemistry and Biochemistry, University of California at San Diego, La Jolla, CA 92093, USA.
Jason T StoflethDepartments of Chemistry and Biochemistry, University of California at San Diego, La Jolla, CA 92093, USA.
Colin H LipperDepartments of Chemistry and Biochemistry, University of California at San Diego, La Jolla, CA 92093, USA.
Mark L PaddockDepartments of Chemistry and Biochemistry, University of California at San Diego, La Jolla, CA 92093, USA.
Ron MittlerDepartment of Biology, University of North Texas, Denton, TX 76203, USA.
Patricia A JenningsDepartments of Chemistry and Biochemistry, University of California at San Diego, La Jolla, CA 92093, USA.
Oded LivnahThe Alexander Silberman Life Science Institute and the Wolfson Centre for Applied Structural Biology, The Hebrew University of Jerusalem, Edmond J. Safra Campus at Givat Ram, Jerusalem 91904, Israel.
Rachel NechushtaiThe Alexander Silberman Life Science Institute and the Wolfson Centre for Applied Structural Biology, The Hebrew University of Jerusalem, Edmond J. Safra Campus at Givat Ram, Jerusalem 91904, Israel.
University of California, San Diego · USHebrew University of Jerusalem · ILUniversity of North Texas · US

Funding

Investigation of the Functional/Folding Landscapes of the Il-1 FamilyR01GM054038 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JENNINGS, PATRICIA A · 2002 to 2010
$2.4M
The New Family of NEET Proteins: 2Fe-2S Protein Mediated Health and DiseaseR01GM101467 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JENNINGS, PATRICIA A · 2012 to 2015
$1.3M
FOLDING MECHANISM OF A BETA PROTEINR29GM054038 · NIGMS · UNIVERSITY OF CALIFORNIA SAN DIEGO · PI JENNINGS, PATRICIA A · 1996 to 2000
$106k
NIGMS NIH HHS GM101467NIGMS NIH HHS GM54038NIGMS NIH HHS R01 GM054038NIGMS NIH HHS R01 GM101467NIGMS NIH HHS R29 GM054038
6 · The paper itself

Abstract

NAF-1 is an important [2Fe-2S] NEET protein associated with human health and disease. A mis-splicing mutation in NAF-1 results in Wolfram Syndrome type 2, a lethal childhood disease. Upregulation of NAF-1 is found in epithelial breast cancer cells, and suppression of NAF-1 expression by knockdown significantly suppresses tumor growth. Key to NAF-1 function is the NEET fold with its [2Fe-2S] cluster. In this work, the high-resolution structure of native NAF-1 was determined to 1.65 Å resolution (R factor = 13.5%) together with that of a mutant in which the single His ligand of its [2Fe-2S] cluster, His114, was replaced by Cys. The NAF-1 H114C mutant structure was determined to 1.58 Å resolution (R factor = 16.0%). All structural differences were localized to the cluster binding site. Compared with native NAF-1, the [2Fe-2S] clusters of the H114C mutant were found to (i) be 25-fold more stable, (ii) have a redox potential that is 300 mV more negative and (iii) have their cluster donation/transfer function abolished. Because no global structural differences were found between the mutant and the native (wild-type) NAF-1 proteins, yet significant functional differences exist between them, the NAF-1 H114C mutant is an excellent tool to decipher the underlying biological importance of the [2Fe-2S] cluster of NAF-1 in vivo.

Indexed as

Point MutationCrystallography, X-RayIron-Sulfur ProteinsLigandsNative Polyacrylamide Gel ElectrophoresisSpectrophotometry, UltravioletIron-Sulfur ProteinsLigands2Fe–2S cluster transfer and cluster stabilityautophagybreast cancerlongevityredox potentialWFS2

Identifiers

PMID24914968
PMCPMC4051502
OpenAlexW1977119305

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.