Evidence map›Paper›PMID 24914955›Full record

ArticlePloS one2014

SNX31: a novel sorting nexin associated with the uroplakin-degrading multivesicular bodies in terminally differentiated urothelial cells.

Neide Vieira, Fang-Ming Deng, Feng-Xia Liang, Yi Liao, Jennifer Chang, Ge Zhou, Weiyue Zheng, Jean-Pierre Simon, Mingxiao Ding, Xue-Ru Wu and 3 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. FishJournal of virology · 2024
    Article
  4. Contact Lens Wear Alters Transcriptional Responses tobioRxiv : the preprint server for biology · 2024
    Article
  5. Article
  6. Review
  7. Article
  8. Phosphoinositide Recognition Sites Are Blocked by Metabolite Attachment.Frontiers in cell and developmental biology · 2021
    Article
  9. Review
  10. Article
  11. The emerging role of sorting nexins in cardiovascular diseases.Clinical science (London, England : 1979) · 2019
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Biogenesis of endosome-derived transport carriers.Cellular and molecular life sciences : CMLS · 2015
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Neide VieiraDepartment of Cell Biology, NYU Cancer Institute, NYU Langone Medical Center, New York, New York, United States of America.
Fang-Ming DengDepartment of Pathology, NYU Cancer Institute, NYU Langone Medical Center, New York, New York, United States of America.
Feng-Xia LiangDepartment of Dermatology, NYU Cancer Institute, NYU Langone Medical Center, New York, New York, United States of America.
Yi LiaoDepartment of Cell Biology, NYU Cancer Institute, NYU Langone Medical Center, New York, New York, United States of America.
Jennifer ChangDepartment of Cell Biology, NYU Cancer Institute, NYU Langone Medical Center, New York, New York, United States of America.
Ge ZhouDepartment of Biochemistry and Molecular Pharmacology, NYU Cancer Institute, NYU Langone Medical Center, New York, New York, United States of America.
Weiyue ZhengDepartment of Cell Biology, NYU Cancer Institute, NYU Langone Medical Center, New York, New York, United States of America.
Jean-Pierre SimonDepartment of Cell Biology, NYU Cancer Institute, NYU Langone Medical Center, New York, New York, United States of America.
Mingxiao DingCollege of Life Sciences, Peking University, Beijing, People's Republic of China.
Xue-Ru WuDepartment of Pathology, NYU Cancer Institute, NYU Langone Medical Center, New York, New York, United States of America; Department of Urology; NYU Cancer Institute, NYU Langone Medical Center, New York University, New York, New York, United States of America; Veterans Affairs New York Harbor Healthcare Systems, Manhattan Campus, New York, New York, United States of America.
Rok RomihInstitute of Cell Biology, Faculty of Medicine, University of Ljubljana, Ljubljana, Slovenia.
Gert KreibichDepartment of Cell Biology, NYU Cancer Institute, NYU Langone Medical Center, New York, New York, United States of America.
Tung-Tien SunDepartment of Cell Biology, NYU Cancer Institute, NYU Langone Medical Center, New York, New York, United States of America; Department of Dermatology, NYU Cancer Institute, NYU Langone Medical Center, New York, New York, United States of America; Department of Biochemistry and Molecular Pharmacology, NYU Cancer Institute, NYU Langone Medical Center, New York, New York, United States of America; Department of Urology; NYU Cancer Institute, NYU Langone Medical Center, New York University, New York, New York, United States of America.
NYU Langone Health · USPeking University · CNUniversity of Ljubljana · SIVA NY Harbor Healthcare System · US

Funding

Uroplakins and Baterial InfectionP01DK052206 · NIDDK · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI SUN, TUNG-TIEN · 1999 to 2015
$19.6M
Reagent/Service CoreP01CA165980 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI TANG, ERIC MOON-SHONG M. · 2013 to 2023
$13.5M
BIOCHEMISTRY OF UROTHELIAL DIFFERENTIATIONR01DK039753 · NIDDK · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI SUN, TUNG-TIEN · 1987 to 2012
$4.6M
ROLE OF TAMM-HORSFALL PROTEIN IN URINARY TRACT DEFENSER01DK056903 · NIDDK · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI WU, XUE-RU · 2000 to 2018
$4.6M
Molecular and Genetic Studies of Bladder TumorigenesisI01BX002049 · VA · VA NEW YORK HARBOR HLTHCARE/SYS/BROOKLYN · PI WU, XUE-RU · 2014 to 2022
–
BLRD VA I01 BX002049NCI NIH HHS P01 CA165980NIDDK NIH HHS DK39753NIDDK NIH HHS DK52206NIDDK NIH HHS P01 DK052206NIDDK NIH HHS R01 DK039753NIDDK NIH HHS R01 DK056903
6 · The paper itself

Abstract

Uroplakins (UP), a group of integral membrane proteins, are major urothelial differentiation products that form 2D crystals of 16-nm particles (urothelial plaques) covering the apical surface of mammalian bladder urothelium. They contribute to the urothelial barrier function and, one of them, UPIa, serves as the receptor for uropathogenic Escherichia coli. It is therefore important to understand the mechanism by which these surface-associated uroplakins are degraded. While it is known that endocytosed uroplakin plaques are targeted to and line the multivesicular bodies (MVBs), it is unclear how these rigid-looking plaques can go to the highly curved membranes of intraluminal vesicles (ILVs). From a cDNA subtraction library, we identified a highly urothelium-specific sorting nexin, SNX31. SNX31 is expressed, like uroplakins, in terminally differentiated urothelial umbrella cells where it is predominantly associated with MVBs. Apical membrane proteins including uroplakins that are surface biotin-tagged are endocytosed and targeted to the SNX31-positive MVBs. EM localization demonstrated that SNX31 and uroplakins are both associated not only with the limiting membranes of MVBs containing uroplakin plaques, but also with ILVs. SNX31 can bind, on one hand, the PtdIns3P-enriched lipids via its N-terminal PX-domain, and, on the other hand, it binds uroplakins as demonstrated by co-immunoprecipitation and proximity ligation assay, and by its reduced membrane association in uroplakin II-deficient urothelium. The fact that in urothelial umbrella cells MVBs are the only major intracellular organelles enriched in both PtdIns3P and uroplakins may explain SNX31's MVB-specificity in these cells. However, in MDCK and other cultured cells transfected SNX31 can bind to early endosomes possibly via lipids. These data support a model in which SNX31 mediates the endocytic degradation of uroplakins by disassembling/collapsing the MVB-associated uroplakin plaques, thus enabling the uroplakin-containing (but 'softened') membranes to bud and form the ILVs for lysosomal degradation and/or exosome formation.

Indexed as

Cell DifferentiationAnimalsBiomarkersCattleCell MembraneDogsEndocytosisEndosomesGene Knockout TechniquesMadin Darby Canine Kidney CellsMice, Inbred C57BLModels, BiologicalMultivesicular BodiesPhosphatidylinositol 3-KinasesPhosphatidylinositol PhosphatesProtein BindingBiomarkersPhosphatidylinositol 3-Kinasesphosphatidylinositol 3-phosphatePhosphatidylinositol PhosphatesSorting NexinsUroplakins

Identifiers

PMID24914955
PMCPMC4051706
OpenAlexW2038190929

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.