Evidence map›Paper›PMID 24914406›Full record

ArticleMolecular cytogenetics2014

Abnormalities in spontaneous abortions detected by G-banding and chromosomal microarray analysis (CMA) at a national reference laboratory.

Boris T Wang, Thomas P Chong, Fatih Z Boyar, Kimberly A Kopita, Leslie P Ross, Mohamed M El-Naggar, Trilochan Sahoo, Jia-Chi Wang, Morteza Hemmat, Mary H Haddadin and 2 more

Open access · goldAbstract read
In one paragraph

Article in Molecular cytogenetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
8.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 91 citations in OpenAlex.

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  11. Low-pass genome sequencing-based detection of absence of heterozygosity: validation in clinical cytogenetics.Genetics in medicine : official journal of the American College of Medical Genetics · 2021
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  12. Review
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  16. Comprehensive genetic analysis of pregnancy loss by chromosomal microarrays: outcomes, benefits, and challenges.Genetics in medicine : official journal of the American College of Medical Genetics · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Boris T WangCytogenetics Department, Quest Diagnostics Nichols Institute, San Juan Capistrano, CA 92690, California.
Thomas P ChongCytogenetics Department, Quest Diagnostics Nichols Institute, San Juan Capistrano, CA 92690, California.
Fatih Z BoyarCytogenetics Department, Quest Diagnostics Nichols Institute, San Juan Capistrano, CA 92690, California.
Kimberly A KopitaCytogenetics Department, Quest Diagnostics Nichols Institute, San Juan Capistrano, CA 92690, California.
Leslie P RossCytogenetics Department, Quest Diagnostics Nichols Institute, San Juan Capistrano, CA 92690, California.
Mohamed M El-NaggarCytogenetics Department, Quest Diagnostics Nichols Institute, San Juan Capistrano, CA 92690, California.
Trilochan SahooCytogenetics Department, Quest Diagnostics Nichols Institute, San Juan Capistrano, CA 92690, California.
Jia-Chi WangCytogenetics Department, Quest Diagnostics Nichols Institute, San Juan Capistrano, CA 92690, California.
Morteza HemmatCytogenetics Department, Quest Diagnostics Nichols Institute, San Juan Capistrano, CA 92690, California.
Mary H HaddadinCytogenetics Department, Quest Diagnostics Nichols Institute, San Juan Capistrano, CA 92690, California.
Renius OwenCytogenetics Department, Quest Diagnostics Nichols Institute, San Juan Capistrano, CA 92690, California.
Arturo L AnguianoCytogenetics Department, Quest Diagnostics Nichols Institute, San Juan Capistrano, CA 92690, California.
Quest Diagnostics (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCytogenetic evaluation of products of conception (POC) for chromosomal abnormalities is central to determining the cause of pregnancy loss. We compared the test success rates in various specimen types and the frequencies of chromosomal abnormalities detected by G-banding analysis with those found by Oligo-SNP chromosomal microarray analysis (CMA). We evaluated the benefit of CMA testing in cases of failed culture growth.

methodsConventional cytogenetic results of 5457 consecutive POC specimens were reviewed and categorized as placental villi, fetal parts, and unspecified POC tissue. The CMA was performed on 268 cases. Of those, 32 cases had concurrent G-banding results. The remaining 236 cases included 107 cases with culture failure and 129 cases evaluated by CMA alone.

resultsThe overall POC culture success rate was 75%, with the lowest for fetal parts (37.4%) and the highest for placental villi (81%). The abnormality rate was 58% for placental villi, but only 25% for fetal parts. Of the abnormalities detected, the most common were aneuploidies, including trisomy 16, triploidy, monosomy X, trisomy 22, trisomy 21 and trisomy 15, while the least encountered aneuploidies were trisomy 1, trisomy 19 and monosomies (except monosomy 21). Overall, POC specimens studied by CMA were successful in 89.6% of cases and yielded a 44.6% abnormality rate.

conclusionsPlacental villi yielded higher rates of culture success and a higher percentage of abnormal karyotypes than did other specimen types. The Oligo-SNP CMA method has demonstrated a viable alternative to the G-banding method in view of its advantages in detection of submicroscopic genomic aberrations, shorter turnaround time due to elimination of time required for culture and a higher test success rate.

Indexed as

CMAG-bandingMaternal deciduous tissuePlacental villiPOCUPD

Identifiers

PMID24914406
PMCPMC4049495
OpenAlexW2123782727

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.