Evidence map›Paper›PMID 24914166›Full record

ArticlePhilosophical transactions of the Royal Society of London. Series B, Biological sciences2014

7 Å resolution in protein two-dimensional-crystal X-ray diffraction at Linac Coherent Light Source.

Bill Pedrini, Ching-Ju Tsai, Guido Capitani, Celestino Padeste, Mark S Hunter, Nadia A Zatsepin, Anton Barty, W Henry Benner, Sébastien Boutet, Geoffrey K Feld and 15 more

Open access · bronzeAbstract read
In one paragraph

Article in Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Strategies for sample delivery for femtosecond crystallography.Acta crystallographica. Section D, Structural biology · 2019
    Review
  6. Article
  7. Article
  8. Article
  9. Perspective: Opportunities for ultrafast science at SwissFEL.Structural dynamics (Melville, N.Y.) · 2017
    Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. The birth of a new field.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 7 institutions in 3 countries.

Bill PedriniPaul Scherrer Institute, 5232 Villigen PSI, Switzerland bill.pedrini@psi.ch.
Ching-Ju TsaiPaul Scherrer Institute, 5232 Villigen PSI, Switzerland.
Guido CapitaniPaul Scherrer Institute, 5232 Villigen PSI, Switzerland.
Celestino PadestePaul Scherrer Institute, 5232 Villigen PSI, Switzerland.
Mark S HunterLawrence Livermore National Laboratory, 7000 East Avenue, Livermore, CA 94550, USA.
Nadia A ZatsepinDepartment of Physics, Arizona State University, 300 E. University Drive, Tempe, AZ 85287, USA.
Anton BartyCenter for Free-Electron Laser Science, DESY, Notkestrasse 85, 22607 Hamburg, Germany.
W Henry BennerLawrence Livermore National Laboratory, 7000 East Avenue, Livermore, CA 94550, USA.
Sébastien BoutetLinac Coherent Light Source, 2575 Sand Hill Road, Menlo Park, CA 94025, USA.
Geoffrey K FeldLawrence Livermore National Laboratory, 7000 East Avenue, Livermore, CA 94550, USA.
Stefan P Hau-RiegeLawrence Livermore National Laboratory, 7000 East Avenue, Livermore, CA 94550, USA.
Richard A KirianCenter for Free-Electron Laser Science, DESY, Notkestrasse 85, 22607 Hamburg, Germany.
Christopher KupitzDepartment of Physics, Arizona State University, 300 E. University Drive, Tempe, AZ 85287, USA.
Marc MesserschmittLinac Coherent Light Source, 2575 Sand Hill Road, Menlo Park, CA 94025, USA.
John I OgrenPhysics Department, Boston University, 590 Commonwealth Avenue, Boston, MA 02215, USA.
Tommaso PardiniLawrence Livermore National Laboratory, 7000 East Avenue, Livermore, CA 94550, USA.
Brent SegelkeLawrence Livermore National Laboratory, 7000 East Avenue, Livermore, CA 94550, USA.
Garth J WilliamsLinac Coherent Light Source, 2575 Sand Hill Road, Menlo Park, CA 94025, USA.
John C H SpenceDepartment of Physics, Arizona State University, 300 E. University Drive, Tempe, AZ 85287, USA.
Rafael AbelaPaul Scherrer Institute, 5232 Villigen PSI, Switzerland.
Matthew ColemanLawrence Livermore National Laboratory, 7000 East Avenue, Livermore, CA 94550, USA.
James E EvansEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, 3335 Innovation Boulevard, Richland, WA 99354, USA.
Gebhard F X SchertlerPaul Scherrer Institute, 5232 Villigen PSI, Switzerland.
Matthias FrankLawrence Livermore National Laboratory, 7000 East Avenue, Livermore, CA 94550, USA frank1@llnl.gov.
Xiao-Dan LiPaul Scherrer Institute, 5232 Villigen PSI, Switzerland xiao.li@psi.ch.
Lawrence Livermore National Laboratory · USPaul Scherrer Institute · CHArizona State University · USLinac Coherent Light Source · USUniversität Hamburg · DEBoston University · USPacific Northwest National Laboratory · US

Funding

Femtosecond nano-crystallography of membrane proteinsR01GM095583 · NIGMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI FROMME, PETRA · 2010 to 2023
$4.3M
Real-time imaging of dynamic biological processes at nanometer spatial resolutionRC1GM091755 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI EVANS, JAMES E · 2009 to 2010
$999k
NIGMS NIH HHS 5RC1GM091755NIGMS NIH HHS GM095583NIGMS NIH HHS R01 GM095583NIGMS NIH HHS RC1 GM091755
6 · The paper itself

Abstract

Membrane proteins arranged as two-dimensional crystals in the lipid environment provide close-to-physiological structural information, which is essential for understanding the molecular mechanisms of protein function. Previously, X-ray diffraction from individual two-dimensional crystals did not represent a suitable investigational tool because of radiation damage. The recent availability of ultrashort pulses from X-ray free-electron lasers (XFELs) has now provided a means to outrun the damage. Here, we report on measurements performed at the Linac Coherent Light Source XFEL on bacteriorhodopsin two-dimensional crystals mounted on a solid support and kept at room temperature. By merging data from about a dozen single crystal diffraction images, we unambiguously identified the diffraction peaks to a resolution of 7 Å, thus improving the observable resolution with respect to that achievable from a single pattern alone. This indicates that a larger dataset will allow for reliable quantification of peak intensities, and in turn a corresponding increase in the resolution. The presented results pave the way for further XFEL studies on two-dimensional crystals, which may include pump-probe experiments at subpicosecond time resolution.

Indexed as

ElectronsLasersBacteriorhodopsinsCrystallography, X-RayImage Processing, Computer-AssistedProtein ConformationX-Ray DiffractionBacteriorhodopsinsbacteriorhodopsincrystallographic data analysistwo-dimensional protein crystalX-ray diffractionX-ray free-electron laser

Identifiers

PMID24914166
PMCPMC4052875
OpenAlexW2144946128

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.