Evidence map›Paper›PMID 24914152›Full record

ArticlePhilosophical transactions of the Royal Society of London. Series B, Biological sciences2014

The Mn₄Ca photosynthetic water-oxidation catalyst studied by simultaneous X-ray spectroscopy and crystallography using an X-ray free-electron laser.

Rosalie Tran, Jan Kern, Johan Hattne, Sergey Koroidov, Julia Hellmich, Roberto Alonso-Mori, Nicholas K Sauter, Uwe Bergmann, Johannes Messinger, Athina Zouni and 2 more

Abstract read
In one paragraph

Article in Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Review
  3. Effects of x-ray free-electron laser pulse intensity on the Mn KStructural dynamics (Melville, N.Y.) · 2021
    Article
  4. The birth of a new field.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2014
    Article
  5. Methods development for diffraction and spectroscopy studies of metalloenzymes at X-ray free-electron lasers.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Rosalie TranPhysical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Jan KernPhysical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA LCLS, SLAC National Accelerator Laboratory, Menlo Park, CA 94025, USA.
Johan HattnePhysical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Sergey KoroidovInstitutionen för Kemi, Kemiskt Biologiskt Centrum, Umeå Universitet, Umeå, Sweden.
Julia HellmichInstitut für Biologie, Humboldt-Universität Berlin, Berlin 10099, Germany.
Roberto Alonso-MoriLCLS, SLAC National Accelerator Laboratory, Menlo Park, CA 94025, USA.
Nicholas K SauterPhysical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Uwe BergmannLCLS, SLAC National Accelerator Laboratory, Menlo Park, CA 94025, USA.
Johannes MessingerInstitutionen för Kemi, Kemiskt Biologiskt Centrum, Umeå Universitet, Umeå, Sweden.
Athina ZouniInstitut für Biologie, Humboldt-Universität Berlin, Berlin 10099, Germany.
Junko YanoPhysical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Vittal K YachandraPhysical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA vkyachandra@lbl.gov.

Funding

X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
Taking Snapshots of the Water-Oxidation Reaction by the Mn4Ca Oxygen-Evolving Complex Using X-ray Crystallography and SpectroscopyR01GM055302 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI YACHANDRA, VITTAL · 1997 to 2022
$9.1M
Realizing New Horizons in X-ray Crystallography Data ProcessingR01GM095887 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI SAUTER, NICHOLAS K · 2011 to 2014
$1.5M
Towards real-time XFEL data reduction with CCTBXR01GM102520 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI SAUTER, NICHOLAS K · 2012 to 2015
$1.4M
Structure and Function of the Mn Oxygen-Evolving ComplexR56GM055302 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI YACHANDRA, VITTAL · 2009 to 2009
$530k
Simultaneous Time-Resolved X-ray Spectroscopy and Crystallography: A MechanisticF32GM100595 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI TRAN, ROSALIE · 2012 to 2013
$101k
NIGMS NIH HHS F32 GM100595NIGMS NIH HHS GM095887NIGMS NIH HHS GM102520NIGMS NIH HHS GM 55302NIGMS NIH HHS P41 GM103393NIGMS NIH HHS P41GM103393NIGMS NIH HHS R01 GM055302NIGMS NIH HHS R01 GM095887NIGMS NIH HHS R01 GM102520NIGMS NIH HHS R56 GM055302
6 · The paper itself

Abstract

The structure of photosystem II and the catalytic intermediate states of the Mn₄CaO₅ cluster involved in water oxidation have been studied intensively over the past several years. An understanding of the sequential chemistry of light absorption and the mechanism of water oxidation, however, requires a new approach beyond the conventional steady-state crystallography and X-ray spectroscopy at cryogenic temperatures. In this report, we present the preliminary progress using an X-ray free-electron laser to determine simultaneously the light-induced protein dynamics via crystallography and the local chemistry that occurs at the catalytic centre using X-ray spectroscopy under functional conditions at room temperature.

Indexed as

LightModels, MolecularCalcium CompoundsCatalytic DomainCrystallography, X-RayManganese CompoundsMolecular ConformationPhotosystem II Protein ComplexSpectrometry, X-Ray EmissionWaterX-Ray DiffractionCalcium CompoundsManganese CompoundsPhotosystem II Protein ComplexWatermanganeseoxygen-evolving complexphotosystem IIX-ray crystallographyX-ray emission spectroscopyX-ray free-electron laser

Identifiers

PMID24914152
PMCPMC4052861

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.