Evidence map›Paper›PMID 24914047›Full record

ArticleNucleic acids research2014

Repetitive RNA unwinding by RNA helicase A facilitates RNA annealing.

Hye Ran Koh, Li Xing, Lawrence Kleiman, Sua Myong

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 51 citations in OpenAlex.

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  6. Circular RNAs in Cell Cycle Regulation of Cancers.International journal of molecular sciences · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Hye Ran KohDepartment of Physics, University of Illinois, Urbana, IL 61801, USA Institute for Genomic Biology, University of Illinois, Urbana, IL 61801, USA.
Li XingLady Davis Institute for Medical Research and McGill AIDS Centre, Jewish General Hospital, Montreal, Quebec, H3T 1E2, Canada Department of Medicine, McGill University, Montreal, Quebec, H3G 1Y6, Canada.
Lawrence KleimanLady Davis Institute for Medical Research and McGill AIDS Centre, Jewish General Hospital, Montreal, Quebec, H3T 1E2, Canada Department of Medicine, McGill University, Montreal, Quebec, H3G 1Y6, Canada.
Sua MyongInstitute for Genomic Biology, University of Illinois, Urbana, IL 61801, USA Department of Bioengineering, University of Illinois, Urbana, IL 61801, USA Physics Frontier Center (Center of Physics for Living Cells), University of Illinois, Urbana, IL 61801, USA Biophysics and Computational Biology, 1110 W. Green St., Urbana, IL 61801, USA smyong@illinois.edu.
University of Illinois Urbana-Champaign · USJewish General Hospital · CAMcGill University · CA

Funding

Quantitative Stepwise Analysis of RNA InterferenceDP2GM105453 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI MYONG, SUA · 2012 to 2012
$2.4M
CIHRNCCDPHP CDC HHS 1DP2GM105453NIGMS NIH HHS DP2 GM105453
6 · The paper itself

Abstract

Helicases contribute to diverse biological processes including replication, transcription and translation. Recent reports suggest that unwinding of some helicases display repetitive activity, yet the functional role of the repetitiveness requires further investigation. Using single-molecule fluorescence assays, we elucidated a unique unwinding mechanism of RNA helicase A (RHA) that entails discrete substeps consisting of binding, activation, unwinding, stalling and reactivation stages. This multi-step process is repeated many times by a single RHA molecule without dissociation, resulting in repetitive unwinding/rewinding cycles. Our kinetic and mutational analysis indicates that the two double stand RNA binding domains at the N-terminus of RHA are responsible for such repetitive unwinding behavior in addition to providing an increased binding affinity to RNA. Further, the repetitive unwinding induces an efficient annealing of a complementary RNA by making the unwound strand more accessible. The complex and unusual mechanism displayed by RHA may help in explaining how the repetitive unwinding of helicases contributes to their biological functions.

Indexed as

DEAD-box RNA HelicasesHEK293 CellsHumansProtein Structure, TertiaryRNA-Binding ProteinsRNA, Double-StrandedDEAD-box RNA HelicasesRNA-Binding ProteinsRNA, Double-Stranded

Identifiers

PMID24914047
PMCPMC4117756
OpenAlexW2124045546

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.