Evidence map›Paper›PMID 24913233›Full record

ArticleThe Journal of experimental medicine2014

Frequent disruption of the RB pathway in indolent follicular lymphoma suggests a new combination therapy.

Elisa Oricchio, Giovanni Ciriello, Man Jiang, Michael H Boice, Jonathan H Schatz, Adriana Heguy, Agnes Viale, Elisa de Stanchina, Julie Teruya-Feldstein, Alyssa Bouska and 7 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
  2. Advances in the multi-omics landscape of follicular lymphoma.International journal of biological sciences · 2023
    Review
  3. Article
  4. Non-Hodgkin Lymphoma Metabolism.Advances in experimental medicine and biology · 2021
    Article
  5. Article
  6. Article
  7. Article
  8. Follicular lymphoma.Nature reviews. Disease primers · 2019
    Review
  9. Article
  10. Article
  11. Article
  12. Genetic and epigenetic inactivation ofScience translational medicine · 2017
    Article
  13. Murine models of germinal center derived-lymphomas.Current opinion in immunology · 2017
    Review
  14. Recurrent Mutations in the MTOR Regulator RRAGC in Follicular Lymphoma.Clinical cancer research : an official journal of the American Association for Cancer Research · 2016
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Non-Hodgkin Lymphoma Metabolism.Advances in experimental medicine and biology
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 9 institutions in 2 countries.

Elisa OricchioCancer Biology & Genetics Program, Computational Biology Program, Department of Medicine, Human Oncology and Pathogenesis Program, Genomics Core Facility, Molecular Pharmacology Program, Department of Pathology, Department of Epidemiology and Biostatistics, and Cell Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065.
Giovanni CirielloCancer Biology & Genetics Program, Computational Biology Program, Department of Medicine, Human Oncology and Pathogenesis Program, Genomics Core Facility, Molecular Pharmacology Program, Department of Pathology, Department of Epidemiology and Biostatistics, and Cell Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065.
Man JiangCancer Biology & Genetics Program, Computational Biology Program, Department of Medicine, Human Oncology and Pathogenesis Program, Genomics Core Facility, Molecular Pharmacology Program, Department of Pathology, Department of Epidemiology and Biostatistics, and Cell Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065.
Michael H BoiceCancer Biology & Genetics Program, Computational Biology Program, Department of Medicine, Human Oncology and Pathogenesis Program, Genomics Core Facility, Molecular Pharmacology Program, Department of Pathology, Department of Epidemiology and Biostatistics, and Cell Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065.
Jonathan H SchatzCancer Biology & Genetics Program, Computational Biology Program, Department of Medicine, Human Oncology and Pathogenesis Program, Genomics Core Facility, Molecular Pharmacology Program, Department of Pathology, Department of Epidemiology and Biostatistics, and Cell Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065Cancer Biology & Genetics Program, Computational Biology Program, Department of Medicine, Human Oncology and Pathogenesis Program, Genomics Core Facility, Molecular Pharmacology Program, Department of Pathology, Department of Epidemiology and Biostatistics, and Cell Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065.
Adriana HeguyCancer Biology & Genetics Program, Computational Biology Program, Department of Medicine, Human Oncology and Pathogenesis Program, Genomics Core Facility, Molecular Pharmacology Program, Department of Pathology, Department of Epidemiology and Biostatistics, and Cell Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065.
Agnes VialeCancer Biology & Genetics Program, Computational Biology Program, Department of Medicine, Human Oncology and Pathogenesis Program, Genomics Core Facility, Molecular Pharmacology Program, Department of Pathology, Department of Epidemiology and Biostatistics, and Cell Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065.
Elisa de StanchinaCancer Biology & Genetics Program, Computational Biology Program, Department of Medicine, Human Oncology and Pathogenesis Program, Genomics Core Facility, Molecular Pharmacology Program, Department of Pathology, Department of Epidemiology and Biostatistics, and Cell Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065.
Julie Teruya-FeldsteinCancer Biology & Genetics Program, Computational Biology Program, Department of Medicine, Human Oncology and Pathogenesis Program, Genomics Core Facility, Molecular Pharmacology Program, Department of Pathology, Department of Epidemiology and Biostatistics, and Cell Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065.
Alyssa BouskaPathology and Microbiology, University of Nebraska Medical Center, Omaha, NE 68198.
Tim McKeithanPathology and Microbiology, University of Nebraska Medical Center, Omaha, NE 68198.
Chris SanderCancer Biology & Genetics Program, Computational Biology Program, Department of Medicine, Human Oncology and Pathogenesis Program, Genomics Core Facility, Molecular Pharmacology Program, Department of Pathology, Department of Epidemiology and Biostatistics, and Cell Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065.
Wayne TamDepartment of Pathology, Weill-Cornell Medical School, New York, NY 10065.
Venkatraman E SeshanCancer Biology & Genetics Program, Computational Biology Program, Department of Medicine, Human Oncology and Pathogenesis Program, Genomics Core Facility, Molecular Pharmacology Program, Department of Pathology, Department of Epidemiology and Biostatistics, and Cell Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065.
Wing-Chung ChanPathology and Microbiology, University of Nebraska Medical Center, Omaha, NE 68198.
R S K ChagantiCancer Biology & Genetics Program, Computational Biology Program, Department of Medicine, Human Oncology and Pathogenesis Program, Genomics Core Facility, Molecular Pharmacology Program, Department of Pathology, Department of Epidemiology and Biostatistics, and Cell Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065.
Hans-Guido WendelCancer Biology & Genetics Program, Computational Biology Program, Department of Medicine, Human Oncology and Pathogenesis Program, Genomics Core Facility, Molecular Pharmacology Program, Department of Pathology, Department of Epidemiology and Biostatistics, and Cell Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065 Wendelh@mskcc.org.
Computational Physics (United States) · USUniversity of Nebraska Medical Center · USCancer Research And Biostatistics · USGenomics (United Kingdom) · GBMolecular Oncology (United States) · USWeatherford College · USCancer Genetics (United States) · USCornell University · USMemorial Sloan Kettering Cancer Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Elisa de Stanchina · 1985 to 2026
$347.4M
CORE--VECTOR PRODUCTIONP30DK056465 · NIDDK · FRED HUTCHINSON CANCER RESEARCH CENTER · PI HARKEY, MICHAEL A · 1999 to 2014
$14.9M
MOLECULAR CLASSIFICATION OF B-CELL LYMPHOMAU01CA084967 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI CHAN, WING C. · 1999 to 2004
$4.1M
The contribution of protein translation to tumorigenesisR01CA142798 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI WENDEL, HANS-GUIDO · 2010 to 2014
$1.9M
Dissecting the Genetics Of Follicular Lymphoma To Find New TherapiesK99CA175179 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI ORICCHIO, ELISA · 2014 to 2014
$148k
NCI NIH HHS 1K99CA175179-01A1NCI NIH HHS K99 CA175179NCI NIH HHS P30 CA008748NCI NIH HHS R01 CA142798NCI NIH HHS R01-CA142798-01NCI NIH HHS U01 CA084967NCI NIH HHS UO1 CA 84967NIDDK NIH HHS P30 DK056465
6 · The paper itself

Abstract

Loss of cell cycle controls is a hallmark of cancer and has a well-established role in aggressive B cell malignancies. However, the role of such lesions in indolent follicular lymphoma (FL) is unclear and individual lesions have been observed with low frequency. By analyzing genomic data from two large cohorts of indolent FLs, we identify a pattern of mutually exclusive (P = 0.003) genomic lesions that impair the retinoblastoma (RB) pathway in nearly 50% of FLs. These alterations include homozygous and heterozygous deletions of the p16/CDKN2a/b (7%) and RB1 (12%) loci, and more frequent gains of chromosome 12 that include CDK4 (29%). These aberrations are associated with high-risk disease by the FL prognostic index (FLIPI), and studies in a murine FL model confirm their pathogenic role in indolent FL. Increased CDK4 kinase activity toward RB1 is readily measured in tumor samples and indicates an opportunity for CDK4 inhibition. We find that dual CDK4 and BCL2 inhibitor treatment is safe and effective against available models of FL. In summary, frequent RB pathway lesions in indolent, high-risk FLs indicate an untapped therapeutic opportunity.

Indexed as

Lymphoma, FollicularRetinoblastoma ProteinAnimalsAntineoplastic Combined Chemotherapy ProtocolsCell Line, TumorCyclin-Dependent Kinase 4Cyclin-Dependent Kinase Inhibitor p15Cyclin-Dependent Kinase Inhibitor p16HumansMaleMiceNeoplasms, ExperimentalProto-Oncogene Proteins c-bcl-2Bcl2 protein, mouseCDK4 protein, humanCdk4 protein, mouseCdkn2a protein, mouseCDKN2B protein, humanCdkn2b protein, mouseCyclin-Dependent Kinase 4Cyclin-Dependent Kinase Inhibitor p15Cyclin-Dependent Kinase Inhibitor p16Proto-Oncogene Proteins c-bcl-2Retinoblastoma Protein

Identifiers

PMID24913233
PMCPMC4076578
OpenAlexW2130189838

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.