Evidence map›Paper›PMID 24912185›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Investigation of triterpene synthesis and regulation in oats reveals a role for β-amyrin in determining root epidermal cell patterning.

Ariane C Kemen, Suvi Honkanen, Rachel E Melton, Kim C Findlay, Sam T Mugford, Keiko Hayashi, Kosmas Haralampidis, Susan J Rosser, Anne Osbourn

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 83 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Methyl Jasmonate- and Salicylic Acid-Induced Transcription FactorInternational journal of molecular sciences · 2023
    Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Review
  12. Review
  13. Metabolic profiling for dissection of late leaf spot disease resistance mechanism in groundnut.Physiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Article
  14. Dynamic Transcriptomic and Metabolomic Analyses ofFrontiers in plant science · 2021
    Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Ariane C KemenDepartments of Metabolic Biology and.
Suvi HonkanenDepartments of Metabolic Biology andInstitute of Molecular Cell and Systems Biology, University of Glasgow, Glasgow G12 8QQ, United Kingdom; and.
Rachel E MeltonDepartments of Metabolic Biology and.
Kim C FindlayCell and Developmental Biology, John Innes Centre, Norwich, Norfolk NR4 7UH, United Kingdom;
Sam T MugfordDepartments of Metabolic Biology and.
Keiko HayashiDepartments of Metabolic Biology and.
Kosmas HaralampidisDepartment of Biology, University of Athens, 15784 Athens, Greece.
Susan J RosserInstitute of Molecular Cell and Systems Biology, University of Glasgow, Glasgow G12 8QQ, United Kingdom; and.
Anne OsbournDepartments of Metabolic Biology and anne.osbourn@jic.ac.uk.
University of Glasgow · GBJohn Innes Centre · GBNational and Kapodistrian University of Athens · GR

Funding

Biotechnology and Biological Sciences Research Council BB/J004561/1Biotechnology and Biological Sciences Research Council BBS/E/J/00000614
6 · The paper itself

Abstract

Sterols have important functions in membranes and signaling. Plant sterols are synthesized via the isoprenoid pathway by cyclization of 2,3-oxidosqualene to cycloartenol. Plants also convert 2,3-oxidosqualene to other sterol-like cyclization products, including the simple triterpene β-amyrin. The function of β-amyrin per se is unknown, but this molecule can serve as an intermediate in the synthesis of more complex triterpene glycosides associated with plant defense. β-Amyrin is present at low levels in the roots of diploid oat (Avena strigosa). Oat roots also synthesize the β-amyrin-derived triterpene glycoside avenacin A-1, which provides protection against soil-borne diseases. The genes for the early steps in avenacin A-1 synthesis [saponin-deficient 1 and 2 (Sad1 and Sad2)] have been recruited from the sterol pathway by gene duplication and neofunctionalization. Here we show that Sad1 and Sad2 are regulated by an ancient root developmental process that is conserved across diverse species. Sad1 promoter activity is dependent on an L1 box motif, implicating sterol/lipid-binding class IV homeodomain leucine zipper transcription factors as potential regulators. The metabolism of β-amyrin is blocked in sad2 mutants, which therefore accumulate abnormally high levels of this triterpene. The accumulation of elevated levels of β-amyrin in these mutants triggers a "superhairy" root phenotype. Importantly, this effect is manifested very early in the establishment of the root epidermis, causing a greater proportion of epidermal cells to be specified as root hair cells rather than nonhair cells. Together these findings suggest that simple triterpenes may have widespread and as yet largely unrecognized functions in plant growth and development.

Indexed as

AvenaCytochrome P-450 Enzyme SystemGene Expression Regulation, PlantGlucuronidaseGreen Fluorescent ProteinsIntramolecular TransferasesMicroscopy, Electron, ScanningMicroscopy, FluorescenceMolecular Sequence DataMutationOleanolic AcidPhylogenyPlant EpidermisPlant ProteinsPlant RootsPlants, Genetically Modified2,3-oxidosqualene-beta-amyrin-cyclaseavenacin A 1beta-amyrinCytochrome P-450 Enzyme SystemGlucuronidaseGreen Fluorescent ProteinsIntramolecular TransferasesOleanolic AcidPlant ProteinsSaponinsTriterpenescell specificationhormonesroot development

Identifiers

PMID24912185
PMCPMC4060722
OpenAlexW2059392661

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.