Evidence map›Paper›PMID 24912147›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Microscopic insights into the protein-stabilizing effect of trimethylamine N-oxide (TMAO).

Jianqiang Ma, Ileana M Pazos, Feng Gai

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed, 1 pooled it
12.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 1 synthesis or guideline pooled it, 250 citations in OpenAlex.

  1. Pooled it
  2. Trimethylamine-N-oxide: the microbial cue in immune-mediated disorders.Trends in endocrinology and metabolism: TEM · 2026
    Review
  3. Article
  4. Article
  5. First Hydration Shell Integrity: Key to Protein Stability.Journal of the American Chemical Society · 2026
    Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. De Novo Design of Proteins for Autocatalytic Isopeptide Bond Formation.Journal of the American Chemical Society · 2025
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article

21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jianqiang MaDepartment of Chemistry, University of Pennsylvania, Philadelphia, PA 19104; andUltrafast Optical Processes Laboratory, Philadelphia, PA 19104.
Ileana M PazosDepartment of Chemistry, University of Pennsylvania, Philadelphia, PA 19104; andUltrafast Optical Processes Laboratory, Philadelphia, PA 19104.
Feng GaiDepartment of Chemistry, University of Pennsylvania, Philadelphia, PA 19104; andUltrafast Optical Processes Laboratory, Philadelphia, PA 19104 gai@sas.upenn.edu.
Optica · US

Funding

ULTRAFAST OPTICAL PROCESSES LABORATORYP41GM104605 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI GAI, FENG · 2012 to 2017
$5.6M
Ultrafast Processing in Proteins and Other AssembliesR01GM012592 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI GAI, FENG · 1985 to 2013
$3.5M
ULTRAFAST PROCESSES IN PROTEINS AND OTHER ASSEMBLIESR37GM012592 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI HOCHSTRASSER, ROBIN MAIN · 1992 to 2001
$493k
NIGMS NIH HHS GM012592NIGMS NIH HHS P41 GM104605NIGMS NIH HHS R01 GM012592NIGMS NIH HHS R37 GM012592
6 · The paper itself

Abstract

Although it is widely known that trimethylamine N-oxide (TMAO), an osmolyte used by nature, stabilizes the folded state of proteins, the underlying mechanism of action is not entirely understood. To gain further insight into this important biological phenomenon, we use the C≡N stretching vibration of an unnatural amino acid, p-cyano-phenylalanine, to directly probe how TMAO affects the hydration and conformational dynamics of a model peptide and a small protein. By assessing how the lineshape and spectral diffusion properties of this vibration change with cosolvent conditions, we are able to show that TMAO achieves its protein-stabilizing ability through the combination of (at least) two mechanisms: (i) It decreases the hydrogen bonding ability of water and hence the stability of the unfolded state, and (ii) it acts as a molecular crowder, as suggested by a recent computational study, that can increase the stability of the folded state via the excluded volume effect.

Indexed as

Hydrogen BondingMagnetic Resonance SpectroscopyMethylaminesMicrofilament ProteinsMutationPeptidesProtein ConformationProtein FoldingProteinsProtein StabilityProtein UnfoldingSpectroscopy, Fourier Transform InfraredUreaWaterMethylaminesMicrofilament ProteinsPeptidesProteinstrimethyloxamineUreavillinWater2D IRcrowdinginfraredlinear response function

Identifiers

PMID24912147
PMCPMC4060645
OpenAlexW2006708449

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.