Evidence map›Paper›PMID 24911873›Full record

ArticlePloS one2014

Increased macroH2A1.1 expression correlates with poor survival of triple-negative breast cancer patients.

Anne-Claire Lavigne, Magali Castells, Jérôme Mermet, Silvia Kocanova, Mathieu Dalvai, Kerstin Bystricky

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 28 citations in OpenAlex.

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  4. Cellular senescence in cancer: clinical detection and prognostic implications.Journal of experimental & clinical cancer research : CR · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Anne-Claire LavigneUniversité de Toulouse; Laboratoire de Biologie Moléculaire Eucaryote (LBME); F-31062 Toulouse, France; CNRS; LBME; F-31062 Toulouse, France.
Magali CastellsUniversité de Toulouse; Laboratoire de Biologie Moléculaire Eucaryote (LBME); F-31062 Toulouse, France; CNRS; LBME; F-31062 Toulouse, France.
Jérôme MermetUniversité de Toulouse; Laboratoire de Biologie Moléculaire Eucaryote (LBME); F-31062 Toulouse, France; CNRS; LBME; F-31062 Toulouse, France.
Silvia KocanovaUniversité de Toulouse; Laboratoire de Biologie Moléculaire Eucaryote (LBME); F-31062 Toulouse, France; CNRS; LBME; F-31062 Toulouse, France.
Mathieu DalvaiUniversité de Toulouse; Laboratoire de Biologie Moléculaire Eucaryote (LBME); F-31062 Toulouse, France; CNRS; LBME; F-31062 Toulouse, France.
Kerstin BystrickyUniversité de Toulouse; Laboratoire de Biologie Moléculaire Eucaryote (LBME); F-31062 Toulouse, France; CNRS; LBME; F-31062 Toulouse, France.
Laboratoire de Biologie Moléculaire des Eucaryotes · FRUniversité de Toulouse · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeEpithelial-Mesenchymal Transition (EMT) features appear to be key events in development and progression of breast cancer. Epigenetic modifications contribute to the establishment and maintenance of cancer subclasses, as well as to the EMT process. Whether histone variants contribute to these transformations is not known. We investigated the relative expression levels of histone macroH2A1 splice variants and correlated it with breast cancer status/prognosis/types.

methodsTo detect differential expression of macroH2A1 variant mRNAs in breast cancer cells and tumor samples, we used the following databases: GEO, EMBL-EBI and publisher databases (may-august 2012). We extracted macroH2A1.1/macroH2A1 mRNA ratios and performed correlation studies on intrinsic molecular subclasses of breast cancer and on molecular characteristics of EMT. Associations between molecular and survival data were determined.

resultsWe found increased macroH2A1.1/macroH2A1 mRNA ratios to be associated with the claudin-low intrinsic subtype in breast cancer cell lines. At the molecular level this association translates into a positive correlation between macroH2A1 ratios and molecular characteristics of the EMT process. Moreover, untreated Triple Negative Breast Cancers presenting a high macroH2A1.1 mRNA ratio exhibit a poor outcome.

conclusionThese results provide first evidence that macroH2A1.1 could be exploited as an actor in the maintenance of a transient cellular state in EMT progress towards metastatic development of breast tumors.

Indexed as

Gene Expression Regulation, NeoplasticAlternative SplicingCell Line, TumorEpigenesis, GeneticEpithelial-Mesenchymal TransitionHistonesHumansPrognosisSurvival AnalysisTriple Negative Breast NeoplasmsHistonesmacroH2A histone

Identifiers

PMID24911873
PMCPMC4049614
OpenAlexW1975781002

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.