Evidence map›Paper›PMID 24911189›Full record

ArticlePloS one2014

Secondary ion mass spectrometry imaging of Dictyostelium discoideum aggregation streams.

John Daniel DeBord, Donald F Smith, Christopher R Anderton, Ron M A Heeren, Ljiljana Paša-Tolić, Richard H Gomer, Francisco A Fernandez-Lima

Abstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Article
  3. MeV-SIMS TOF Imaging of Organic Tissue with Continuous Primary Beam.Journal of the American Society for Mass Spectrometry · 2019
    Article
  4. Three Dimensional Secondary Ion Mass Spectrometry Imaging (3D-SIMS) ofJournal of analytical atomic spectrometry · 2019
    Article
  5. Article
  6. Analysis of Chemotherapeutic Drug Delivery at the Single Cell Level Using 3D-MSI-TOF-SIMS.Journal of the American Society for Mass Spectrometry · 2016
    Article
  7. Lipid specific molecular ion emission as a function of the primary ion characteristics in TOF-SIMS.Journal of vacuum science and technology. B, Nanotechnology & microelectronics : materials, processing, measurement, & phenomena : JVST B · 2016
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

John Daniel DeBordDepartment of Chemistry and Biochemistry, Florida International University, Miami, Florida, United States of America.
Donald F SmithFOM Institute AMOLF, Science Park 104, Amsterdam, The Netherlands.
Christopher R AndertonEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, Washington, United States of America.
Ron M A HeerenFOM Institute AMOLF, Science Park 104, Amsterdam, The Netherlands.
Ljiljana Paša-TolićEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, Washington, United States of America.
Richard H GomerDepartment of Biology, Texas A&M University, College Station, Texas, United States of America.
Francisco A Fernandez-LimaDepartment of Chemistry and Biochemistry, Florida International University, Miami, Florida, United States of America.

Funding

Elucidation of a Dictyostelium chaloneR01GM102280 · NIGMS · TEXAS A&M UNIVERSITY · PI GOMER, RICHARD H · 2012 to 2015
$1.1M
Mass Spectrometry based molecular imaging of native biological nanodomainsR00GM106414 · NIGMS · FLORIDA INTERNATIONAL UNIVERSITY · PI FERNANDEZ-LIMA, FRANCISCO · 2012 to 2014
$731k
NIGMS NIH HHS GM102280NIGMS NIH HHS R00 GM106414NIGMS NIH HHS R00GM106414NIGMS NIH HHS R01 GM102280
6 · The paper itself

Abstract

High resolution imaging mass spectrometry could become a valuable tool for cell and developmental biology, but both, high spatial and mass spectral resolution are needed to enable this. In this report, we employed Bi3 bombardment time-of-flight (Bi3 ToF-SIMS) and C60 bombardment Fourier transform ion cyclotron resonance secondary ion mass spectrometry (C60 FTICR-SIMS) to image Dictyostelium discoideum aggregation streams. Nearly 300 lipid species were identified from the aggregation streams. High resolution mass spectrometry imaging (FTICR-SIMS) enabled the generation of multiple molecular ion maps at the nominal mass level and provided good coverage for fatty acyls, prenol lipids, and sterol lipids. The comparison of Bi3 ToF-SIMS and C60 FTICR-SIMS suggested that while the first provides fast, high spatial resolution molecular ion images, the chemical complexity of biological samples warrants the use of high resolution analyzers for accurate ion identification.

Indexed as

DictyosteliumLipidsSpectrometry, Mass, Secondary IonLipids

Identifiers

PMID24911189
PMCPMC4049834

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.