Evidence map›Paper›PMID 24905782›Full record

ReviewAnnual review of biochemistry2014

Metabolic compensation and circadian resilience in prokaryotic cyanobacteria.

Carl Hirschie Johnson, Martin Egli

Abstract readReview
In one paragraph

Review in Annual review of biochemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. A Compensated Clock: Temperature and Nutritional Compensation Mechanisms Across Circadian Systems.BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
    Review
  5. The cyanobacterial circadian clock.Npj biological timing and sleep · 2025
    Review
  6. Article
  7. Temperature compensation through kinetic regulation in biochemical oscillators.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. The inner workings of an ancient biological clock.Trends in biochemical sciences · 2024
    Review
  9. Circadian regulation of metabolism across photosynthetic organisms.The Plant journal : for cell and molecular biology · 2023
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Journal of bacteriology · 2020
    Article
  16. Daily rhythmicity in coastal microbial mats.NPJ biofilms and microbiomes · 2018
    Article
  17. Article
  18. Timing the day: what makes bacterial clocks tick?Nature reviews. Microbiology · 2017
    Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Carl Hirschie JohnsonDepartments of 1Biological Sciences.
Martin Egli

Funding

Circadian Programs in BacteriaR37GM067152 · NIGMS · VANDERBILT UNIVERSITY · PI JOHNSON, CARL HIRSCHIE · 2015 to 2024
$4.1M
Regulation and Significance of Sustained Circadian OscillationsR01GM107434 · NIGMS · VANDERBILT UNIVERSITY · PI JOHNSON, CARL HIRSCHIE · 2013 to 2024
$4.0M
Circadian Programs in BacteriaR01GM067152 · NIGMS · VANDERBILT UNIVERSITY · PI JOHNSON, CARL HIRSCHIE · 2003 to 2014
$3.9M
Structural Biology of the S. elongatus Circadian ClockR01GM073845 · NIGMS · VANDERBILT UNIVERSITY · PI EGLI, MARTIN · 2006 to 2013
$2.4M
Experimental Evolution of Circadian OscillatorsR01GM088595 · NIGMS · VANDERBILT UNIVERSITY · PI JOHNSON, CARL HIRSCHIE · 2009 to 2012
$1.2M
NIGMS NIH HHS GM067152NIGMS NIH HHS GM073845NIGMS NIH HHS GM088595NIGMS NIH HHS GM107434NIGMS NIH HHS R01 GM067152NIGMS NIH HHS R01 GM073845NIGMS NIH HHS R01 GM088595NIGMS NIH HHS R01 GM107434NIGMS NIH HHS R37 GM067152
6 · The paper itself

Abstract

For a biological oscillator to function as a circadian pacemaker that confers a fitness advantage, its timing functions must be stable in response to environmental and metabolic fluctuations. One such stability enhancer, temperature compensation, has long been a defining characteristic of these timekeepers. However, an accurate biological timekeeper must also resist changes in metabolism, and this review suggests that temperature compensation is actually a subset of a larger phenomenon, namely metabolic compensation, which maintains the frequency of circadian oscillators in response to a host of factors that impinge on metabolism and would otherwise destabilize these clocks. The circadian system of prokaryotic cyanobacteria is an illustrative model because it is composed of transcriptional and nontranscriptional oscillators that are coupled to promote resilience. Moreover, the cyanobacterial circadian program regulates gene activity and metabolic pathways, and it can be manipulated to improve the expression of bioproducts that have practical value.

Indexed as

Bacterial ProteinsCircadian ClocksCircadian RhythmCircadian Rhythm Signaling Peptides and ProteinsCyanobacteriaFeedback, PhysiologicalGene Expression Regulation, BacterialHomeostasisProtein BiosynthesisProtein Processing, Post-TranslationalTemperatureTranscription, GeneticBacterial ProteinsCircadian Rhythm Signaling Peptides and ProteinsKaiC protein, cyanobacteriacell divisioncircadiancyanobacteriahomeostasisin vitro oscillatorKaiKaiABCmetabolismnontranscriptional oscillatoroscillatorrobustnessstabilitytemperature compensation

Identifiers

PMID24905782
PMCPMC4259047

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.