Evidence map›Paper›PMID 24902738›Full record

ArticleThe EMBO journal2014

The SNARE protein vti1a functions in dense-core vesicle biogenesis.

Alexander M Walter, Julia Kurps, Heidi de Wit, Susanne Schöning, Trine L Toft-Bertelsen, Juliane Lauks, Iwona Ziomkiewicz, Annita N Weiss, Alexander Schulz, Gabriele Fischer von Mollard and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Conserved Oligomeric Golgi and Neuronal Vesicular Trafficking.Handbook of experimental pharmacology · 2018
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 4 countries.

Alexander M WalterNeurosecretion Group, Department of Neuroscience and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark Department of Functional Genomics and Clinical Genetics, Center for Neurogenomics and Cognitive Research, VU University Amsterdam and VU Medical Center, Amsterdam, The Netherlands.
Julia KurpsDepartment of Functional Genomics and Clinical Genetics, Center for Neurogenomics and Cognitive Research, VU University Amsterdam and VU Medical Center, Amsterdam, The Netherlands.
Heidi de WitDepartment of Functional Genomics and Clinical Genetics, Center for Neurogenomics and Cognitive Research, VU University Amsterdam and VU Medical Center, Amsterdam, The Netherlands.
Susanne SchöningBiochemie III, Fakultät für Chemie, Universität Bielefeld, Bielefeld, Germany.
Trine L Toft-BertelsenNeurosecretion Group, Department of Neuroscience and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.
Juliane LauksDepartment of Functional Genomics and Clinical Genetics, Center for Neurogenomics and Cognitive Research, VU University Amsterdam and VU Medical Center, Amsterdam, The Netherlands.
Iwona ZiomkiewiczDepartment of Plant and Environmental Sciences, University of Copenhagen, Frederiksberg, Denmark.
Annita N WeissDepartment of Pharmacology, University of Michigan, Ann Arbor, MI, USA.
Alexander SchulzDepartment of Plant and Environmental Sciences, University of Copenhagen, Frederiksberg, Denmark.
Gabriele Fischer von MollardBiochemie III, Fakultät für Chemie, Universität Bielefeld, Bielefeld, Germany.
Matthijs VerhageDepartment of Functional Genomics and Clinical Genetics, Center for Neurogenomics and Cognitive Research, VU University Amsterdam and VU Medical Center, Amsterdam, The Netherlands.
Jakob B SørensenNeurosecretion Group, Department of Neuroscience and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark Lundbeck Foundation Center for Biomembranes in Nanomedicine, University of Copenhagen, Copenhagen, Denmark jakobbs@sund.ku.dk.
Amsterdam UMC Location VUmc · NLUniversity of Copenhagen · DKBielefeld University · DELundbeck Foundation · DKUniversity of Michigan–Ann Arbor · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The SNARE protein vti1a is proposed to drive fusion of intracellular organelles, but recent data also implicated vti1a in exocytosis. Here we show that vti1a is absent from mature secretory vesicles in adrenal chromaffin cells, but localizes to a compartment near the trans-Golgi network, partially overlapping with syntaxin-6. Exocytosis is impaired in vti1a null cells, partly due to fewer Ca(2+)-channels at the plasma membrane, partly due to fewer vesicles of reduced size and synaptobrevin-2 content. In contrast, release kinetics and Ca(2+)-sensitivity remain unchanged, indicating that the final fusion reaction leading to transmitter release is unperturbed. Additional deletion of the closest related SNARE, vti1b, does not exacerbate the vti1a phenotype, and vti1b null cells show no secretion defects, indicating that vti1b does not participate in exocytosis. Long-term re-expression of vti1a (days) was necessary for restoration of secretory capacity, whereas strong short-term expression (hours) was ineffective, consistent with vti1a involvement in an upstream step related to vesicle generation, rather than in fusion. We conclude that vti1a functions in vesicle generation and Ca(2+)-channel trafficking, but is dispensable for transmitter release.

Indexed as

AnimalsCalcium ChannelsCell Nucleus StructuresChromaffin CellsExocytosisMiceMice, Mutant StrainsQa-SNARE ProteinsQb-SNARE ProteinsSecretory VesiclesVesicle-Associated Membrane Protein 2Calcium ChannelsQa-SNARE ProteinsQb-SNARE ProteinsVesicle-Associated Membrane Protein 2Vti1a protein, mouseVti1b protein, mouseadrenal chromaffin cellsCa2+‐channelsexocytosisSNAREvesicle biogenesis

Identifiers

PMID24902738
PMCPMC4194101
OpenAlexW2029191046

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.