Evidence map›Paper›PMID 24900659›Full record

ArticleACS medicinal chemistry letters2013

Probing the binding site of abl tyrosine kinase using in situ click chemistry.

Cristina Peruzzotti, Stella Borrelli, Micol Ventura, Rebecca Pantano, Gaia Fumagalli, Michael S Christodoulou, Damiano Monticelli, Marcello Luzzani, Anna Lucia Fallacara, Cristina Tintori and 2 more

Abstract read
In one paragraph

Article in ACS medicinal chemistry letters, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Protein-Templated Fragment Ligations-From Molecular Recognition to Drug Discovery.Angewandte Chemie (International ed. in English) · 2017
    Review
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Cristina PeruzzottiDipartimento di Chimica, Università degli Studi di Milano , Via Golgi 19, 20133 Milano, Italy.
Stella BorrelliDipartimento di Chimica, Università degli Studi di Milano , Via Golgi 19, 20133 Milano, Italy.
Micol VenturaDipartimento di Chimica, Università degli Studi di Milano , Via Golgi 19, 20133 Milano, Italy.
Rebecca PantanoDipartimento di Chimica, Università degli Studi di Milano , Via Golgi 19, 20133 Milano, Italy.
Gaia FumagalliDipartimento di Chimica, Università degli Studi di Milano , Via Golgi 19, 20133 Milano, Italy.
Michael S ChristodoulouDipartimento di Chimica, Università degli Studi di Milano , Via Golgi 19, 20133 Milano, Italy.
Damiano MonticelliDipartimento di Scienze Alta Tecnologia, Università degli Studi dell'Insubria , Via Valleggio 11, 22100 Como, Italy.
Marcello LuzzaniLINNEA SA , Via Cantonale, 6595 Riazzino, Switzerland.
Anna Lucia FallacaraDipartimento Farmaco Chimico Tecnologico, Università degli Studi di Siena , Via Alcide de Gasperi 2, I-53100, Siena, Italy.
Cristina TintoriDipartimento Farmaco Chimico Tecnologico, Università degli Studi di Siena , Via Alcide de Gasperi 2, I-53100, Siena, Italy.
Maurizio BottaDipartimento Farmaco Chimico Tecnologico, Università degli Studi di Siena , Via Alcide de Gasperi 2, I-53100, Siena, Italy.
Daniele PassarellaDipartimento di Chimica, Università degli Studi di Milano , Via Golgi 19, 20133 Milano, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Modern combinatorial chemistry is used to discover compounds with desired function by an alternative strategy, in which the biological target is directly involved in the choice of ligands assembled from a pool of smaller fragments. Herein, we present the first experimental result where the use of in situ click chemistry has been successfully applied to probe the ligand-binding site of Abl and the ability of this enzyme to form its inhibitor. Docking studies show that Abl is able to allow the in situ click chemistry between specific azide and alkyne fragments by binding to Abl-active sites. This report allows medicinal chemists to use protein-directed in situ click chemistry for exploring the conformational space of a ligand-binding pocket and the ability of the protein to guide its inhibitor. This approach can be a novel, valuable tool to guide drug design synthesis in the field of tyrosine kinases.

Indexed as

Abl tyrosine kinaseclick chemistrydrug design synthesisligand-binding site

Identifiers

PMID24900659
PMCPMC4027485

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.