Evidence map›Paper›PMID 24897378›Full record

ArticlePloS one2014

Controlled localization of functionally active proteins to inclusion bodies using leucine zippers.

Su-Lim Choi, Sang Jun Lee, Soo-Jin Yeom, Hyun Ju Kim, Young Ha Rhee, Heung-Chae Jung, Seung-Goo Lee

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Engineering structure and function using thermoresponsive biopolymers.Wiley interdisciplinary reviews. Nanomedicine and nanobiotechnology
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Su-Lim ChoiBiochemicals and Synthetic Biology Research Center, KRIBB, Yuseong-gu, Daejeon, Korea; Department of Bioscience and Biotechnology, Chungnam National University, Yuseong-gu, Daejeon, Korea.
Sang Jun LeeInfection and Immunity Biology Research Center, KRIBB, Yuseong-gu, Daejeon, Korea; Korea University of Science and Technology, Yuseong-gu, Daejeon, Korea.
Soo-Jin YeomBiochemicals and Synthetic Biology Research Center, KRIBB, Yuseong-gu, Daejeon, Korea.
Hyun Ju KimInfection and Immunity Biology Research Center, KRIBB, Yuseong-gu, Daejeon, Korea; Korea University of Science and Technology, Yuseong-gu, Daejeon, Korea.
Young Ha RheeDepartment of Bioscience and Biotechnology, Chungnam National University, Yuseong-gu, Daejeon, Korea.
Heung-Chae JungBiochemicals and Synthetic Biology Research Center, KRIBB, Yuseong-gu, Daejeon, Korea.
Seung-Goo LeeBiochemicals and Synthetic Biology Research Center, KRIBB, Yuseong-gu, Daejeon, Korea; Korea University of Science and Technology, Yuseong-gu, Daejeon, Korea.
Intelligent Synthetic Biology Center · KRChungnam National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Inclusion bodies (IBs) are typically non-functional particles of aggregated proteins. However, some proteins in fusion with amyloid-like peptides, viral coat proteins, and cellulose binding domains (CBDs) generate IB particles retaining the original functions in cells. Here, we attempted to generate CBD IBs displaying functional leucine zipper proteins (LZs) as bait for localizing cytosolic proteins in E. coli. When a red fluorescent protein was tested as a target protein, microscopic observations showed that the IBs red-fluoresced strongly. When different LZ pairs with KDs of 8-1,000 µM were tested as the bait and prey, the localization of the red fluorescence appeared to change following the affinities between the LZs, as observed by fluorescence imaging and flow cytometry. This result proposed that LZ-tagged CBD IBs can be applied as an in vivo matrix to entrap cytosolic proteins in E. coli while maintaining their original activities. In addition, easy detection of localization to IBs provides a unique platform for the engineering and analyses of protein-protein interactions in E. coli.

Indexed as

CytosolEscherichia coliInclusion BodiesLeucine ZippersProtein Conformation

Identifiers

PMID24897378
PMCPMC4045587
OpenAlexW2004478810

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.