Evidence map›Paper›PMID 24896130›Full record

ArticleBiophysical journal2014

Light harvesting by lamellar chromatophores in Rhodospirillum photometricum.

Danielle E Chandler, Johan Strümpfer, Melih Sener, Simon Scheuring, Klaus Schulten

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 56 citations in OpenAlex.

  1. Review
  2. Article
  3. Large-Scale Molecular Dynamics Simulations of Cellular Compartments.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  4. Review
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  14. Review
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  17. Review
  18. Molecular dynamics simulations of large macromolecular complexes.Current opinion in structural biology · 2015
    Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Danielle E ChandlerBeckman Institute, University of Illinois at Urbana-Champaign, Urbana, Illinois.
Johan StrümpferBeckman Institute, University of Illinois at Urbana-Champaign, Urbana, Illinois; Center for Biophysics and Computational Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois.
Melih SenerBeckman Institute, University of Illinois at Urbana-Champaign, Urbana, Illinois.
Simon ScheuringU1006 INSERM, Aix-Marseille Université, Parc Scientifique et Technologique de Luminy, 163 avenue de Luminy, 13009 Marseille, France.
Klaus SchultenDepartment of Physics, University of Illinois at Urbana-Champaign, Urbana, Illinois. Electronic address: kschulte@ks.uiuc.edu.
University of Illinois Urbana-Champaign · USAix-Marseille Université · FR

Funding

WHOLE CELL SIMULATIONP41GM104601 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI TAJKHORSHID, EMAD · 2012 to 2021
$19.0M
NIGMS NIH HHS 9P41GM104601NIGMS NIH HHS P41 GM104601
6 · The paper itself

Abstract

Purple photosynthetic bacteria harvest light using pigment-protein complexes which are often arranged in pseudo-organelles called chromatophores. A model of a chromatophore from Rhodospirillum photometricum was constructed based on atomic force microscopy data. Molecular-dynamics simulations and quantum-dynamics calculations were performed to characterize the intercomplex excitation transfer network and explore the interplay between close-packing and light-harvesting efficiency.

Indexed as

Absorption, PhysicochemicalAmino Acid SequenceBacterial ChromatophoresBacterial ProteinsLight-Harvesting Protein ComplexesMolecular Dynamics SimulationMolecular Sequence DataProtein Structure, TertiaryRhodospirillumBacterial ProteinsLight-Harvesting Protein Complexes

Identifiers

PMID24896130
PMCPMC4052275
OpenAlexW2027926022

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.