Evidence map›Paper›PMID 24896108›Full record

ReviewBiophysical journal2014

Vertex models of epithelial morphogenesis.

Alexander G Fletcher, Miriam Osterfield, Ruth E Baker, Stanislav Y Shvartsman

Abstract readReview
In one paragraph

Review in Biophysical journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 246 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
246citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

246 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Biophysics of lumen morphogenesis.Development (Cambridge, England) · 2026
    Review
  5. The role of geometry in morphogenesis.Development (Cambridge, England) · 2026
    Review
  6. Article
  7. Article
  8. Article
  9. Virtual twins and the future of human developmental biology.NPJ systems biology and applications · 2026
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Physical models of embryonic epithelial healing.PLoS computational biology · 2026
    Review

186 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Alexander G FletcherWolfson Centre for Mathematical Biology, Mathematical Institute, University of Oxford, Oxford, United Kingdom. Electronic address: alexander.fletcher@maths.ox.ac.uk.
Miriam OsterfieldLewis-Sigler Institute for Integrative Genomics, Princeton, New Jersey.
Ruth E BakerWolfson Centre for Mathematical Biology, Mathematical Institute, University of Oxford, Oxford, United Kingdom. Electronic address: ruth.baker@maths.ox.ac.uk.
Stanislav Y ShvartsmanLewis-Sigler Institute for Integrative Genomics, Princeton, New Jersey; Department of Chemical and Biological Engineering, Princeton University, Princeton, New Jersey. Electronic address: stas@princeton.edu.

Funding

Dynamics of epithelial morphogenesisR01GM107103 · NIGMS · PRINCETON UNIVERSITY · PI SHVARTSMAN, STANISLAV Y. · 2014 to 2017
$1.2M
NIGMS NIH HHS 1R01GM107103-01A1NIGMS NIH HHS R01 GM107103
6 · The paper itself

Abstract

The dynamic behavior of epithelial cell sheets plays a central role during numerous developmental processes. Genetic and imaging studies of epithelial morphogenesis in a wide range of organisms have led to increasingly detailed mechanisms of cell sheet dynamics. Computational models offer a useful means by which to investigate and test these mechanisms, and have played a key role in the study of cell-cell interactions. A variety of modeling approaches can be used to simulate the balance of forces within an epithelial sheet. Vertex models are a class of such models that consider cells as individual objects, approximated by two-dimensional polygons representing cellular interfaces, in which each vertex moves in response to forces due to growth, interfacial tension, and pressure within each cell. Vertex models are used to study cellular processes within epithelia, including cell motility, adhesion, mitosis, and delamination. This review summarizes how vertex models have been used to provide insight into developmental processes and highlights current challenges in this area, including progressing these models from two to three dimensions and developing new tools for model validation.

Indexed as

Models, BiologicalMorphogenesisAnimalsCell DifferentiationCell ShapeEpidermal CellsEpidermisEpithelial CellsHumans

Identifiers

PMID24896108
PMCPMC4052277

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.